[←][→] ath   At3g51310 Gene
functional annotation
Function   VPS35 homolog C      
GO BP
GO:0008333 [list] [network] endosome to lysosome transport  (4 genes)  ISS  
GO CC
GO:0030904 [list] [network] retromer complex  (8 genes)  IDA ISS  
GO:0005771 [list] [network] multivesicular body  (14 genes)  IDA  
GO:0016020 [list] [network] membrane  (3629 genes)  IDA  
GO:0005737 [list] [network] cytoplasm  (13880 genes)  ISM  
GO:0043231 [list] [network] intracellular membrane-bounded organelle  (19126 genes)  IDA  
GO MF
KEGG ath04144 [list] [network] Endocytosis (158 genes)
Protein NP_190699.3 
BLAST NP_190699.3 
Orthologous [Ortholog page] VPS35A (ath)  VPS35B (ath)  LOC4334459 (osa)  LOC7485605 (ppo)  LOC7496914 (ppo)  LOC11413082 (mtr)  LOC11423814 (mtr)  LOC18099161 (ppo)  LOC100775573 (gma)  LOC100778365 (gma)  LOC100809289 (gma)  LOC100811902 (gma)  LOC101243768 (sly)  LOC101249253 (sly)  LOC101265987 (sly)  LOC103832036 (bra)  LOC103841052 (bra)  LOC103845916 (bra)  LOC123105482 (tae)  LOC123123265 (tae)  LOC123452787 (hvu) 
Subcellular
localization
wolf
cyto 6,  chlo 4  (predict for NP_190699.3)
Subcellular
localization
TargetP
other 7,  scret 3  (predict for NP_190699.3)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01200 Carbon metabolism 4
ath04146 Peroxisome 3
ath04144 Endocytosis 2
ath00071 Fatty acid degradation 2
ath01212 Fatty acid metabolism 2
Genes directly connected with VPS35C on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
6.7 NQR ARP protein (REF) [detail] 841391
6.5 NUDT3 nudix hydrolase homolog 3 [detail] 844308
6.5 AT4G10050 esterase/lipase/thioesterase family protein [detail] 826596
6.1 AT5G35180 ENHANCED DISEASE RESISTANCE protein (DUF1336) [detail] 833472
5.3 BGAL9 beta galactosidase 9 [detail] 817842
Coexpressed
gene list		 [Coexpressed gene list for VPS35C]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
252150_at
252150_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
252150_at
252150_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
252150_at
252150_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 824294      
Refseq ID (protein) NP_190699.3 


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