[←][→] ath   AT3G51800 Gene
functional annotation
Function   metallopeptidase M24 family protein  
GO BP
GO:0044843 [list] [network] cell cycle G1/S phase transition  (5 genes)  IEP  
GO:0051302 [list] [network] regulation of cell division  (60 genes)  IMP  
GO:0001558 [list] [network] regulation of cell growth  (107 genes)  IMP  
GO:0006351 [list] [network] transcription, DNA-templated  (186 genes)  IDA  
GO:0009734 [list] [network] auxin-activated signaling pathway  (196 genes)  IMP  
GO:0006364 [list] [network] rRNA processing  (276 genes)  IEA  
GO:0007275 [list] [network] multicellular organism development  (2714 genes)  IEA  
GO CC
GO:0005730 [list] [network] nucleolus  (477 genes)  IBA IDA  
GO:0005829 [list] [network] cytosol  (3506 genes)  HDA IDA RCA  
GO:0005886 [list] [network] plasma membrane  (3771 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IDA ISM  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  IBA  
GO MF
GO:0003723 [list] [network] RNA binding  (1790 genes)  IEA  
GO:0003676 [list] [network] nucleic acid binding  (4187 genes)  IBA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_001190060.1  NP_190748.1  NP_850679.1 
BLAST NP_001190060.1  NP_190748.1  NP_850679.1 
Orthologous [Ortholog page] LOC4338500 (osa)  LOC11411098 (mtr)  LOC25487269 (mtr)  LOC100246763 (vvi)  LOC100266121 (vvi)  LOC100282838 (zma)  LOC100781302 (gma)  LOC100784176 (gma)  LOC100787986 (gma)  LOC100788381 (gma)  LOC101255804 (sly)  LOC101267411 (sly)  LOC103635752 (zma)  LOC103841121 (bra)  LOC103848643 (bra)  LOC103860729 (bra) 
Subcellular
localization
wolf
cysk 6,  cyto 2,  chlo 1,  plas 1  (predict for NP_001190060.1)
cysk 6,  cyto 2,  chlo 1,  cyto_plas 1  (predict for NP_190748.1)
cysk 6,  cyto 2,  chlo 1,  plas 1  (predict for NP_850679.1)
Subcellular
localization
TargetP
other 9  (predict for NP_001190060.1)
other 9  (predict for NP_190748.1)
other 9  (predict for NP_850679.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 6
Genes directly connected with ATG2 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
12.9 NOP56 NOP56-like pre RNA processing ribonucleoprotein [detail] 842063
12.7 AT3G05060 NOP56-like pre RNA processing ribonucleoprotein [detail] 819668
10.7 HD2B histone deacetylase 2B [detail] 832328
9.6 ATKRS-1 lysyl-tRNA synthetase 1 [detail] 820343
9.5 AT3G54470 uridine 5'-monophosphate synthase / UMP synthase (PYRE-F) (UMPS) [detail] 824612
7.8 AT4G24830 arginosuccinate synthase family [detail] 828586
7.7 GCD1 ribosomal protein L20 [detail] 836348
5.9 AT1G13730 Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain-containing protein [detail] 837933
Coexpressed
gene list		 [Coexpressed gene list for ATG2]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
246307_at
246307_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
246307_at
246307_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
246307_at
246307_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 824343      
Refseq ID (protein) NP_001190060.1 
NP_190748.1 
NP_850679.1 


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