[←][→] ath   At3g51800 Gene
functional annotation
Function   metallopeptidase M24 family protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0044843 [list] [network] cell cycle G1/S phase transition  (4 genes)  IEP  
GO:0009734 [list] [network] auxin-activated signaling pathway  (65 genes)  IMP  
GO:0051302 [list] [network] regulation of cell division  (78 genes)  IMP  
GO:0001558 [list] [network] regulation of cell growth  (132 genes)  IMP  
GO:0006351 [list] [network] DNA-templated transcription  (159 genes)  IDA  
GO CC
GO:0005730 [list] [network] nucleolus  (387 genes)  HDA IDA  
GO:0005829 [list] [network] cytosol  (2559 genes)  HDA IDA RCA  
GO:0005634 [list] [network] nucleus  (10305 genes)  IDA ISM  
GO MF
GO:0003729 [list] [network] mRNA binding  (1535 genes)  IDA  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG
Protein NP_001190060.1  NP_190748.1  NP_850679.1 
BLAST NP_001190060.1  NP_190748.1  NP_850679.1 
Orthologous [Ortholog page] LOC4338500 (osa)  LOC7460366 (ppo)  LOC7468062 (ppo)  LOC11411098 (mtr)  LOC25487269 (mtr)  LOC100781302 (gma)  LOC100784176 (gma)  LOC100787986 (gma)  LOC100788381 (gma)  LOC101255804 (sly)  LOC101267411 (sly)  LOC103841121 (bra)  LOC103848643 (bra)  LOC103860729 (bra)  LOC123052708 (tae)  LOC123129037 (tae)  LOC123181724 (tae)  LOC123441079 (hvu) 
Subcellular
localization
wolf
cysk 6,  cyto 2,  chlo 1,  plas 1  (predict for NP_001190060.1)
cysk 6,  cyto 2,  chlo 1,  cyto_plas 1  (predict for NP_190748.1)
cysk 6,  cyto 2,  chlo 1,  plas 1  (predict for NP_850679.1)
Subcellular
localization
TargetP
other 9  (predict for NP_001190060.1)
other 9  (predict for NP_190748.1)
other 9  (predict for NP_850679.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 7
ath03010 Ribosome 3
Genes directly connected with ATG2 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
12.9 NOP56 NOP56-like pre RNA processing ribonucleoprotein [detail] 842063
12.1 AT3G05060 NOP56-like pre RNA processing ribonucleoprotein [detail] 819668
11.8 RACK1C_AT receptor for activated C kinase 1C [detail] 821338
10.2 ATKRS-1 lysyl-tRNA synthetase 1 [detail] 820343
6.0 AT1G13730 Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain-containing protein [detail] 837933
Coexpressed
gene list		 [Coexpressed gene list for ATG2]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
246307_at
246307_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
246307_at
246307_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
246307_at
246307_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 824343      
Refseq ID (protein) NP_001190060.1 
NP_190748.1 
NP_850679.1 


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