[←][→] ath   AT3G51890 Gene
functional annotation
Function   Clathrin light chain protein  
GO BP
GO:0048268 [list] [network] clathrin coat assembly  (17 genes)  IBA  
GO:0072583 [list] [network] clathrin-dependent endocytosis  (35 genes)  IBA  
GO CC
GO:0030125 [list] [network] clathrin vesicle coat  (10 genes)  IBA  
GO:0005829 [list] [network] cytosol  (3506 genes)  HDA  
GO:0005886 [list] [network] plasma membrane  (3771 genes)  IBA  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  ISM  
GO MF
GO:0032050 [list] [network] clathrin heavy chain binding  (21 genes)  IBA  
KEGG
Protein NP_566956.4 
BLAST NP_566956.4 
Orthologous [Ortholog page] AT2G20760 (ath)  CLC2 (ath)  LOC4337419 (osa)  LOC4342159 (osa)  LOC7466063 (ppo)  LOC7488013 (ppo)  LOC7490332 (ppo)  LOC7494357 (ppo)  LOC9267670 (osa)  LOC11421620 (mtr)  LOC25493188 (mtr)  LOC25502062 (mtr)  LOC100216721 (zma)  LOC100248438 (vvi)  LOC100277113 (zma)  LOC100783050 (gma)  LOC100788673 (gma)  LOC100808804 (gma)  LOC100813474 (gma)  LOC100817703 (gma)  LOC100818117 (gma)  LOC100820255 (gma)  LOC100854215 (vvi)  LOC101250146 (sly)  LOC101261300 (sly)  LOC101263919 (sly)  LOC101266991 (sly)  LOC103632305 (zma)  LOC103842584 (bra)  LOC103846752 (bra)  LOC103857903 (bra)  LOC103863508 (bra)  LOC103865762 (bra)  LOC103866986 (bra)  LOC113475843 (zma) 
Subcellular
localization
wolf
nucl 9,  cyto_nucl 4,  nucl_plas 4  (predict for NP_566956.4)
Subcellular
localization
TargetP
other 8  (predict for NP_566956.4)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04626 Plant-pathogen interaction 2
Genes directly connected with AT3G51890 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.6 AT1G03290 ELKS/Rab6-interacting/CAST family protein [detail] 838603
7.1 AT1G16670 Protein kinase superfamily protein [detail] 838236
6.4 MEK1 MAP kinase/ ERK kinase 1 [detail] 828713
6.3 AT5G37070 hypothetical protein (Protein of unknown function, DUF538) [detail] 833678
4.4 AT2G46940 fold protein [detail] 819308
Coexpressed
gene list		 [Coexpressed gene list for AT3G51890]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
246305_at
246305_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
246305_at
246305_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
246305_at
246305_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 824352      
Refseq ID (protein) NP_566956.4 


The preparation time of this page was 0.2 [sec].