[←][→] ath   AT3G52090 Gene
functional annotation
Function   DNA-directed RNA polymerase, RBP11-like protein  
GO BP
GO:0006366 [list] [network] transcription by RNA polymerase II  (57 genes)  IEA  
GO CC
GO:0000418 [list] [network] RNA polymerase IV complex  (15 genes)  IDA IPI  
GO:0000419 [list] [network] RNA polymerase V complex  (21 genes)  IDA IPI  
GO:0005665 [list] [network] RNA polymerase II, core complex  (22 genes)  IDA IPI  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0003899 [list] [network] DNA-directed 5'-3' RNA polymerase activity  (59 genes)  ISS  
GO:0046983 [list] [network] protein dimerization activity  (570 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (2280 genes)  IEA  
KEGG ath03020 [list] [network] RNA polymerase (45 genes)
Protein NP_001190064.1  NP_190777.1 
BLAST NP_001190064.1  NP_190777.1 
Orthologous [Ortholog page] LOC4342517 (osa)  LOC7475018 (ppo)  LOC25491968 (mtr)  LOC25495119 (mtr)  LOC100259467 (vvi)  LOC100274213 (zma)  LOC100527865 (gma)  LOC100784219 (gma)  LOC101244156 (sly)  LOC103627413 (zma)  LOC103627414 (zma)  LOC103627418 (zma)  LOC103627422 (zma)  LOC103841143 (bra)  LOC103863497 (bra)  LOC109939981 (zma)  LOC109939982 (zma) 
Subcellular
localization
wolf
cyto 5,  extr 1,  pero 1,  nucl 1,  E.R. 1,  golg 1  (predict for NP_001190064.1)
cyto 6,  nucl 4  (predict for NP_190777.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001190064.1)
other 7  (predict for NP_190777.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00190 Oxidative phosphorylation 7
Genes directly connected with NRPB11 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
8.0 AT5G58740 HSP20-like chaperones superfamily protein [detail] 835988
7.2 AT3G03070 NADH-ubiquinone oxidoreductase-like protein [detail] 821133
7.1 AT3G08610 NADH dehydrogenase ubiquinone 1 alpha subcomplex subunit [detail] 820008
6.3 TO1 thioredoxin O1 [detail] 818065
Coexpressed
gene list		 [Coexpressed gene list for NRPB11]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
252041_at
252041_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
252041_at
252041_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
252041_at
252041_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 824372      
Refseq ID (protein) NP_001190064.1 
NP_190777.1 


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