[←][→] ath   At3g52150 Gene
functional annotation
Function   RNA-binding (RRM/RBD/RNP motifs) family protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0080148 [list] [network] negative regulation of response to water deprivation  (5 genes)  IMP  
GO:1901001 [list] [network] negative regulation of response to salt stress  (14 genes)  IMP  
GO:0010029 [list] [network] regulation of seed germination  (93 genes)  IMP  
GO:1900140 [list] [network] regulation of seedling development  (98 genes)  IMP  
GO:0009409 [list] [network] response to cold  (472 genes)  IEP IMP  
GO:0009651 [list] [network] response to salt stress  (607 genes)  IEP  
GO:0009414 [list] [network] response to water deprivation  (1006 genes)  IEP  
GO CC
GO:0009535 [list] [network] chloroplast thylakoid membrane  (315 genes)  HDA  
GO:0009579 [list] [network] thylakoid  (509 genes)  HDA  
GO:0009941 [list] [network] chloroplast envelope  (582 genes)  HDA  
GO:0009570 [list] [network] chloroplast stroma  (705 genes)  HDA  
GO:0005829 [list] [network] cytosol  (2559 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5004 genes)  HDA IDA ISM  
GO MF
GO:0003697 [list] [network] single-stranded DNA binding  (37 genes)  IDA  
GO:0003729 [list] [network] mRNA binding  (1535 genes)  IDA  
GO:0003723 [list] [network] RNA binding  (1729 genes)  IDA  
KEGG ath03015 [list] [network] mRNA surveillance pathway (119 genes)
ath03018 [list] [network] RNA degradation (113 genes)
Protein NP_001030841.1  NP_566958.3 
BLAST NP_001030841.1  NP_566958.3 
Orthologous [Ortholog page] LOC4346605 (osa)  LOC7454889 (ppo)  LOC11440749 (mtr)  LOC100783567 (gma)  LOC100811197 (gma)  LOC103841151 (bra)  LOC103848533 (bra)  LOC103863484 (bra)  LOC123103412 (tae)  LOC123111608 (tae)  LOC123120979 (tae)  LOC123397727 (hvu) 
Subcellular
localization
wolf
chlo 9  (predict for NP_001030841.1)
chlo 9  (predict for NP_566958.3)
Subcellular
localization
TargetP
chlo 8  (predict for NP_001030841.1)
chlo 8  (predict for NP_566958.3)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 8
ath00860 Porphyrin metabolism 2
Genes directly connected with PSRP2 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
16.0 PRPL11 plastid ribosomal protein l11 [detail] 840194
13.8 RPL21C Ribosomal protein L21 [detail] 840472
13.2 AT3G13120 Ribosomal protein S10p/S20e family protein [detail] 820500
12.2 GSA2 glutamate-1-semialdehyde 2,1-aminomutase 2 [detail] 824034
10.8 RPL27 ribosomal protein large subunit 27 [detail] 834097
9.4 PCB2 NAD(P)-binding Rossmann-fold superfamily protein [detail] 831984
8.9 AT1G01080 RNA-binding (RRM/RBD/RNP motifs) family protein [detail] 839463
8.5 LIL3:1 Chlorophyll A-B binding family protein [detail] 827479
8.0 AT2G35410 RNA-binding (RRM/RBD/RNP motifs) family protein [detail] 818107
7.3 LPA2 low psii accumulation2 [detail] 3771487
Coexpressed
gene list		 [Coexpressed gene list for PSRP2]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
252032_at
252032_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
252032_at
252032_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
252032_at
252032_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 824379      
Refseq ID (protein) NP_001030841.1 
NP_566958.3 


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