[←][→] ath   At3g52450 Gene
functional annotation
Function   plant U-box 22    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0002679 [list] [network] respiratory burst involved in defense response  (5 genes)  IGI  
GO:0051865 [list] [network] protein autoubiquitination  (17 genes)  IDA  
GO:0016567 [list] [network] protein ubiquitination  (434 genes)  IDA  
GO:0009414 [list] [network] response to water deprivation  (1006 genes)  IMP  
GO:0006952 [list] [network] defense response  (2370 genes)  IGI  
GO CC
GO:0005829 [list] [network] cytosol  (2559 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
GO:0061630 [list] [network] ubiquitin protein ligase activity  (78 genes)  IEA  
GO:0004842 [list] [network] ubiquitin-protein transferase activity  (261 genes)  IDA IGI  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG
Protein NP_190813.1 
BLAST NP_190813.1 
Orthologous [Ortholog page] PUB23 (ath)  LOC4329585 (osa)  LOC4337468 (osa)  LOC7475137 (ppo)  LOC7488089 (ppo)  LOC11419064 (mtr)  LOC18100610 (ppo)  LOC18109603 (ppo)  LOC25483686 (mtr)  LOC25483688 (mtr)  LOC25483689 (mtr)  LOC25499491 (mtr)  LOC100778012 (gma)  LOC100785598 (gma)  LOC100786877 (gma)  PUB8 (gma)  LOC100809123 (gma)  LOC100809839 (gma)  LOC100811258 (gma)  LOC100811969 (gma)  LOC101246503 (sly)  LOC101248322 (sly)  LOC101266855 (sly)  LOC101267151 (sly)  LOC101268603 (sly)  LOC103841175 (bra)  LOC103857599 (bra)  LOC103860764 (bra)  LOC103863463 (bra)  LOC103865496 (bra)  LOC103867327 (bra)  LOC123131308 (tae)  LOC123131310 (tae)  LOC123134976 (tae)  LOC123134991 (tae)  LOC123134993 (tae)  LOC123142135 (tae)  LOC123142137 (tae)  LOC123403862 (hvu)  LOC123403891 (hvu) 
Subcellular
localization
wolf
nucl 5,  cyto 4,  plas 1,  golg 1,  golg_plas 1  (predict for NP_190813.1)
Subcellular
localization
TargetP
other 7  (predict for NP_190813.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04016 MAPK signaling pathway - plant 2
ath04626 Plant-pathogen interaction 2
Genes directly connected with PUB22 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
10.5 PUB23 plant U-box 23 [detail] 818166
6.8 WRKY22 WRKY family transcription factor [detail] 827896
6.3 ZAT11 C2H2 and C2HC zinc fingers superfamily protein [detail] 818319
5.6 WRKY29 WRKY family transcription factor [detail] 828455
5.2 AT4G20860 FAD-binding Berberine family protein [detail] 827834
Coexpressed
gene list		 [Coexpressed gene list for PUB22]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
252045_at
252045_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
252045_at
252045_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
252045_at
252045_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 824410      
Refseq ID (protein) NP_190813.1 


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