[←][→] ath   At3g52460 Gene
functional annotation
Function   hydroxyproline-rich glycoprotein family protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0048638 [list] [network] regulation of developmental growth  (257 genes)  IEA  
GO:0071695 [list] [network] anatomical structure maturation  (335 genes)  IEA  
GO:2000241 [list] [network] regulation of reproductive process  (507 genes)  IEA  
GO:0090558 [list] [network] plant epidermis development  (635 genes)  IEA  
GO:0051239 [list] [network] regulation of multicellular organismal process  (657 genes)  IEA  
GO:0010015 [list] [network] root morphogenesis  (669 genes)  IEA  
GO:0030154 [list] [network] cell differentiation  (1176 genes)  IEA  
GO:0009416 [list] [network] response to light stimulus  (1981 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
KEGG
Protein NP_190814.1 
BLAST NP_190814.1 
Orthologous [Ortholog page] LOC7484693 (ppo)  LOC7488098 (ppo)  LOC103841177 (bra)  LOC103860765 (bra) 
Subcellular
localization
wolf
chlo 2,  nucl 2,  cyto 1,  extr 1,  vacu 1,  chlo_mito 1  (predict for NP_190814.1)
Subcellular
localization
TargetP
other 8,  chlo 4  (predict for NP_190814.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00190 Oxidative phosphorylation 2
Genes directly connected with AT3G52460 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
6.0 AT1G61860 Protein kinase superfamily protein [detail] 842483
5.7 Iqd4 IQ-domain 4 [detail] 817181
5.6 TPR14 tetratricopeptide repeat (TPR)-containing protein [detail] 836639
5.5 AT2G38500 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [detail] 818432
5.3 AT3G52470 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family [detail] 824412
3.6 AT4G12450 zinc finger (C2H2 type) family protein [detail] 826857
Coexpressed
gene list		 [Coexpressed gene list for AT3G52460]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
252046_at
252046_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
252046_at
252046_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
252046_at
252046_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 824411      
Refseq ID (protein) NP_190814.1 


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