[][] ath   AT3G52470 Gene
functional annotation
Function   Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
GO BP
GO CC
GO:0046658 [list] [network] anchored component of plasma membrane  (154 genes)  IBA  
GO:0009506 [list] [network] plasmodesma  (962 genes)  IBA IDA  
GO:0016021 [list] [network] integral component of membrane  (4803 genes)  IEA  
GO MF
KEGG
Protein NP_190815.1 
BLAST NP_190815.1 
Orthologous [Ortholog page] NHL12 (ath)AT2G35970 (ath)NHL1 (ath)AT3G44220 (ath)NHL22 (ath)AT5G06330 (ath)AT5G22200 (ath)LOC4329582 (osa)LOC4344425 (osa)LOC4349828 (osa)LOC4351561 (osa)LOC7488100 (ppo)LOC7489313 (ppo)LOC11406595 (mtr)LOC11444695 (mtr)LOC25483722 (mtr)LOC25499471 (mtr)LOC100193113 (zma)LOC100246840 (vvi)LOC100252904 (vvi)LOC100273203 (zma)LOC100282844 (zma)LOC100284275 (zma)LOC100284961 (zma)LOC100500476 (gma)LOC100781210 (gma)LOC100788592 (gma)LOC100795832 (gma)LOC100812905 (gma)LOC100813741 (gma)LOC100818413 (gma)LOC100819285 (gma)LOC101245724 (sly)LOC101249693 (sly)LOC101257972 (sly)LOC101262036 (sly)LOC103641626 (zma)LOC103841178 (bra)LOC103845565 (bra)LOC103846080 (bra)LOC103848066 (bra)LOC103851746 (bra)LOC103856834 (bra)LOC103860766 (bra)LOC103863462 (bra)LOC103865501 (bra)LOC103870322 (bra)LOC112416446 (mtr)
Subcellular
localization
wolf
cyto 2,  extr 2,  E.R. 2,  cyto_E.R. 2,  plas 1,  cyto_nucl 1,  E.R._vacu 1  (predict for NP_190815.1)
Subcellular
localization
TargetP
scret 6,  other 6  (predict for NP_190815.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT3G52470 on the network
coex z* Locus Function* Coexpression
detail
Entrez Gene ID*
5.4 AT3G52460 hydroxyproline-rich glycoprotein family protein [detail] 824411
5.0 AT5G42570 B-cell receptor-associated 31-like protein [detail] 834264
4.6 GAE6 UDP-D-glucuronate 4-epimerase 6 [detail] 821965
Coexpressed
gene list
[Coexpressed gene list for AT3G52470]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
252058_at
252058_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
252058_at
252058_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
252058_at
252058_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 824412    
Refseq ID (protein) NP_190815.1 


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