[←][→] ath   At3g52470 Gene
functional annotation
Function   Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0009813 [list] [network] flavonoid biosynthetic process  (84 genes)  IEA  
GO:0046148 [list] [network] pigment biosynthetic process  (155 genes)  IEA  
GO:1901617 [list] [network] organic hydroxy compound biosynthetic process  (164 genes)  IEA  
GO:0090558 [list] [network] plant epidermis development  (635 genes)  IEA  
GO:0071554 [list] [network] cell wall organization or biogenesis  (898 genes)  IEA  
GO:0048589 [list] [network] developmental growth  (1060 genes)  IEA  
GO:0030154 [list] [network] cell differentiation  (1176 genes)  IEA  
GO:0019752 [list] [network] carboxylic acid metabolic process  (1307 genes)  IEA  
GO:0009416 [list] [network] response to light stimulus  (1981 genes)  IEA  
GO:0098542 [list] [network] defense response to other organism  (2060 genes)  IEA  
GO CC
GO:0009506 [list] [network] plasmodesma  (871 genes)  HDA  
GO MF
KEGG
Protein NP_190815.1 
BLAST NP_190815.1 
Orthologous [Ortholog page] NHL12 (ath)  AT2G35970 (ath)  NHL1 (ath)  AT3G44220 (ath)  NHL22 (ath)  AT5G06330 (ath)  AT5G22200 (ath)  LOC4335811 (osa)  LOC4349828 (osa)  LOC4351561 (osa)  LOC7488100 (ppo)  LOC7489313 (ppo)  LOC11406595 (mtr)  LOC11444695 (mtr)  LOC18100613 (ppo)  LOC25483722 (mtr)  LOC25499471 (mtr)  LOC100500476 (gma)  LOC100781210 (gma)  LOC100788592 (gma)  LOC100795832 (gma)  LOC100812905 (gma)  LOC100813741 (gma)  LOC100818413 (gma)  LOC100819285 (gma)  LOC101245724 (sly)  LOC101249693 (sly)  LOC101257972 (sly)  LOC101262036 (sly)  LOC103841178 (bra)  LOC103845565 (bra)  LOC103846080 (bra)  LOC103848066 (bra)  LOC103851746 (bra)  LOC103856834 (bra)  LOC103860766 (bra)  LOC103863462 (bra)  LOC103865501 (bra)  LOC103870322 (bra)  LOC123045426 (tae)  LOC123053263 (tae)  LOC123086518 (tae)  LOC123091479 (tae)  LOC123096444 (tae)  LOC123101287 (tae)  LOC123102976 (tae)  LOC123111125 (tae)  LOC123115913 (tae)  LOC123120119 (tae)  LOC123124542 (tae)  LOC123189180 (tae)  LOC123395012 (hvu)  LOC123411717 (hvu)  LOC123430266 (hvu)  LOC123448031 (hvu) 
Subcellular
localization
wolf
cyto 2,  extr 2,  E.R. 2,  cyto_E.R. 2,  plas 1,  cyto_nucl 1,  E.R._vacu 1  (predict for NP_190815.1)
Subcellular
localization
TargetP
scret 6,  other 6  (predict for NP_190815.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00940 Phenylpropanoid biosynthesis 3
ath00400 Phenylalanine, tyrosine and tryptophan biosynthesis 3
ath01230 Biosynthesis of amino acids 3
ath00360 Phenylalanine metabolism 2
Genes directly connected with AT3G52470 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
5.3 AT3G52460 hydroxyproline-rich glycoprotein family protein [detail] 824411
5.0 AT5G42570 B-cell receptor-associated 31-like protein [detail] 834264
4.7 ADT5 arogenate dehydratase 5 [detail] 832326
Coexpressed
gene list		 [Coexpressed gene list for AT3G52470]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
252058_at
252058_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
252058_at
252058_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
252058_at
252058_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 824412      
Refseq ID (protein) NP_190815.1 


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