ATTED-II : GeneID search result

[←][→] ath AT3G52500 Gene

functional annotation

Function

Eukaryotic aspartyl protease family protein

GO BP

GO:0030163 [list] [network] protein catabolic process	(603 genes)	IBA
GO:0006508 [list] [network] proteolysis	(901 genes)	IBA

GO CC

GO:0009505 [list] [network] plant-type cell wall	(220 genes)	IBA IDA
GO:0005618 [list] [network] cell wall	(685 genes)	IDA
GO:0005576 [list] [network] extracellular region	(3363 genes)	ISM
GO:0005829 [list] [network] cytosol	(3506 genes)	RCA

GO MF

GO:0004190 [list] [network] aspartic-type endopeptidase activity

(68 genes)

IBA

KEGG

Protein

NP_566966.1

BLAST

NP_566966.1

Orthologous

[Ortholog page] LOC4337460 (osa) LOC7460067 (ppo) LOC7485292 (ppo) LOC25499458 (mtr) LOC100245971 (vvi) LOC100248461 (vvi) LOC100251106 (vvi) LOC100252858 (vvi) LOC100264893 (vvi) LOC100264942 (vvi) LOC100280633 (zma) LOC100788618 (gma) LOC100805927 (gma) LOC100808552 (gma) LOC100810876 (gma) LOC101259161 (sly) LOC103860768 (bra) LOC103863458 (bra) LOC104880161 (vvi) LOC112940023 (sly)

Subcellular
localization
wolf

extr 4, vacu 2, golg 1, chlo 1, nucl 1, cyto 1, cyto_nucl 1, golg_plas 1

(predict for NP_566966.1)

Subcellular
localization
TargetP

scret 6

(predict for NP_566966.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

Genes directly connected with AT3G52500 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
4.9	FLA18	FASCICLIN-like arabinogalactan protein 18 precursor	[detail]	820342
4.8	AT3G28200	Peroxidase superfamily protein	[detail]	822446
4.8	AT1G01300	Eukaryotic aspartyl protease family protein	[detail]	839375

Coexpressed
gene list

[Coexpressed gene list for AT3G52500]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

252048_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

252048_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

252048_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	824415
Refseq ID (protein)	NP_566966.1

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