[←][→] ath   AT3G52580 Gene
functional annotation
Function   Ribosomal protein S11 family protein  
GO BP
GO:0000028 [list] [network] ribosomal small subunit assembly  (26 genes)  IBA  
GO:0000462 [list] [network] maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)  (27 genes)  IBA  
GO:0006412 [list] [network] translation  (1149 genes)  IBA  
GO CC
GO:0022627 [list] [network] cytosolic small ribosomal subunit  (110 genes)  IBA  
GO:0005829 [list] [network] cytosol  (3506 genes)  HDA RCA  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  ISM  
GO MF
GO:0048027 [list] [network] mRNA 5'-UTR binding  (7 genes)  IBA  
GO:0070181 [list] [network] small ribosomal subunit rRNA binding  (11 genes)  IBA  
GO:0003735 [list] [network] structural constituent of ribosome  (248 genes)  IBA  
KEGG ath03010 [list] [network] Ribosome (356 genes)
Protein NP_190826.1 
BLAST NP_190826.1 
Orthologous [Ortholog page] AT2G36160 (ath)  AT3G11510 (ath)  LOC4328392 (osa)  LOC4329563 (osa)  LOC4335791 (osa)  LOC7463000 (ppo)  LOC7478501 (ppo)  LOC7497065 (ppo)  LOC11440830 (mtr)  LOC11442711 (mtr)  LOC100192550 (zma)  LOC100216896 (zma)  LOC100248468 (vvi)  LOC100255492 (vvi)  LOC100256298 (vvi)  LOC100286294 (zma)  LOC100306566 (gma)  LOC100499665 (gma)  LOC100780604 (gma)  LOC100785807 (gma)  LOC100786325 (gma)  LOC100787077 (gma)  LOC101245320 (sly)  LOC101247549 (sly)  LOC101256436 (sly)  LOC103629630 (zma)  LOC103629631 (zma)  LOC103841188 (bra)  LOC103845969 (bra)  LOC103846956 (bra)  LOC103857606 (bra)  LOC103859393 (bra)  LOC103865520 (bra)  LOC103867311 (bra)  LOC103870337 (bra) 
Subcellular
localization
wolf
cyto 9  (predict for NP_190826.1)
Subcellular
localization
TargetP
other 8  (predict for NP_190826.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 21
Genes directly connected with AT3G52580 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
13.2 AT2G36160 Ribosomal protein S11 family protein [detail] 818188
12.0 EMB1080 Nucleic acid-binding, OB-fold-like protein [detail] 824054
11.8 RPL18 ribosomal protein L18 [detail] 819725
Coexpressed
gene list		 [Coexpressed gene list for AT3G52580]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
252055_at
252055_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
252055_at
252055_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
252055_at
252055_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 824424      
Refseq ID (protein) NP_190826.1 


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