[←][→] ath   At3g52940 Gene
functional annotation
Function   Ergosterol biosynthesis ERG4/ERG24 family    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0016126 [list] [network] sterol biosynthetic process  (23 genes)  TAS  
GO:0009793 [list] [network] embryo development ending in seed dormancy  (697 genes)  IMP  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
GO:0050613 [list] [network] delta14-sterol reductase activity  (1 genes)  IGI IMP  
GO:0050661 [list] [network] NADP binding  (34 genes)  ISS  
KEGG ath00100 [list] [network] Steroid biosynthesis (36 genes)
Protein NP_566975.1  NP_974420.1 
BLAST NP_566975.1  NP_974420.1 
Orthologous [Ortholog page] LOC9268311 (osa)  LOC9270556 (osa)  LOC18100073 (ppo)  LOC25483897 (mtr)  LOC100270656 (tae)  HYD2 (sly)  LOC100805994 (gma)  LOC103850274 (bra)  LOC103872154 (bra)  LOC123069393 (tae)  LOC123183233 (tae)  LOC123451499 (hvu) 
Subcellular
localization
wolf
cyto 4,  plas 2,  vacu 2,  cyto_nucl 2,  cyto_pero 2  (predict for NP_566975.1)
nucl 3,  plas 2,  vacu 2,  cyto_nucl 2  (predict for NP_974420.1)
Subcellular
localization
TargetP
scret 8,  other 3  (predict for NP_566975.1)
scret 8,  other 3  (predict for NP_974420.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00100 Steroid biosynthesis 3
Genes directly connected with FK on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
5.9 CPI1 cyclopropyl isomerase [detail] 835105
5.7 AT4G27720 Major facilitator superfamily protein [detail] 828886
5.7 AT1G72480 Lung seven transmembrane receptor family protein [detail] 843580
5.3 KCS4 3-ketoacyl-CoA synthase 4 [detail] 838528
5.1 AT5G07590 Transducin/WD40 repeat-like superfamily protein [detail] 830652
Coexpressed
gene list		 [Coexpressed gene list for FK]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
251995_at
251995_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
251995_at
251995_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
251995_at
251995_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 824460      
Refseq ID (protein) NP_566975.1 
NP_974420.1 


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