[←][→] ath   At3g52960 Gene
functional annotation
Function   Thioredoxin superfamily protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO CC
GO:0009579 [list] [network] thylakoid  (509 genes)  HDA  
GO:0009941 [list] [network] chloroplast envelope  (582 genes)  HDA  
GO:0009570 [list] [network] chloroplast stroma  (705 genes)  HDA  
GO:0005829 [list] [network] cytosol  (2559 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5004 genes)  HDA ISM  
GO:0009536 [list] [network] plastid  (5425 genes)  HDA  
GO MF
KEGG
Protein NP_190864.1 
BLAST NP_190864.1 
Orthologous [Ortholog page] LOC4328586 (osa)  LOC4341570 (osa)  LOC18104326 (ppo)  LOC25499388 (mtr)  LOC100783307 (gma)  LOC103842281 (bra)  LOC103872156 (bra)  LOC104644379 (sly)  LOC123127185 (tae)  LOC123136781 (tae)  LOC123144269 (tae)  LOC123148378 (tae)  LOC123156199 (tae)  LOC123166769 (tae)  LOC123403884 (hvu)  LOC123411553 (hvu) 
Subcellular
localization
wolf
chlo 8,  mito 2  (predict for NP_190864.1)
Subcellular
localization
TargetP
chlo 9  (predict for NP_190864.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01230 Biosynthesis of amino acids 3
ath00190 Oxidative phosphorylation 2
Genes directly connected with AT3G52960 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
10.2 YLMG1-1 YGGT family protein [detail] 819931
10.2 PHR2 photolyase/blue-light receptor 2 [detail] 819372
9.5 Pnsl5 cyclophilin 20-2 [detail] 831151
9.0 TIC21 translocon at inner membrane of chloroplasts 21 [detail] 816018
7.6 FAP1 Chalcone-flavanone isomerase family protein [detail] 825492
7.6 AT2G31670 Stress responsive alpha-beta barrel domain protein [detail] 817723
Coexpressed
gene list		 [Coexpressed gene list for AT3G52960]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
251993_at
251993_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
251993_at
251993_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
251993_at
251993_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 824462      
Refseq ID (protein) NP_190864.1 


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