[←][→] ath   AT3G53170 Gene
functional annotation
Function   LOW protein: PPR containing protein  
GO BP
GO CC
GO:0005730 [list] [network] nucleolus  (477 genes)  IDA  
GO:0005739 [list] [network] mitochondrion  (4405 genes)  ISM  
GO:0009507 [list] [network] chloroplast  (5095 genes)  ISM  
GO MF
KEGG
Protein NP_001319735.1  NP_001326325.1  NP_001326326.1  NP_001326327.1 
BLAST NP_001319735.1  NP_001326325.1  NP_001326326.1  NP_001326327.1 
Orthologous [Ortholog page] LOC4331394 (osa)  LOC7482295 (ppo)  LOC11410820 (mtr)  LOC100251669 (vvi)  LOC100810625 (gma)  LOC101244690 (sly)  LOC103630811 (zma)  LOC103841240 (bra) 
Subcellular
localization
wolf
chlo 9,  cyto 1,  mito 1  (predict for NP_001319735.1)
chlo 9,  cyto 1,  mito 1  (predict for NP_001326325.1)
chlo 9,  cyto 1,  mito 1  (predict for NP_001326326.1)
cyto 6,  chlo 1,  pero 1  (predict for NP_001326327.1)
Subcellular
localization
TargetP
chlo 5  (predict for NP_001319735.1)
chlo 5  (predict for NP_001326325.1)
chlo 5  (predict for NP_001326326.1)
other 8  (predict for NP_001326327.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT3G53170 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.1 AT1G18485 Pentatricopeptide repeat (PPR) superfamily protein [detail] 838429
5.9 AT2G04860 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 815032
5.7 AT4G04370 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 825757
5.0 UGT73C7 UDP-glucosyl transferase 73C7 [detail] 824482
4.5 AT2G19400 AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein [detail] 816459
4.3 MCA2 PLAC8 family protein [detail] 816287
Coexpressed
gene list		 [Coexpressed gene list for AT3G53170]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
251972_at
251972_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
251972_at
251972_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
251972_at
251972_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 824483      
Refseq ID (protein) NP_001319735.1 
NP_001326325.1 
NP_001326326.1 
NP_001326327.1 


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