[←][→] ath   At3g53230 Gene
functional annotation
Function   ATPase, AAA-type, CDC48 protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0045732 [list] [network] positive regulation of protein catabolic process  (7 genes)  IDA  
GO CC
GO:0005654 [list] [network] nucleoplasm  (253 genes)  IDA  
GO:0005730 [list] [network] nucleolus  (387 genes)  HDA  
GO:0005794 [list] [network] Golgi apparatus  (1182 genes)  HDA  
GO:0005886 [list] [network] plasma membrane  (2529 genes)  ISM  
GO:0005829 [list] [network] cytosol  (2559 genes)  HDA IDA  
GO MF
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG ath04141 [list] [network] Protein processing in endoplasmic reticulum (215 genes)
Protein NP_190891.1 
BLAST NP_190891.1 
Orthologous [Ortholog page] CDC48 (gma)  CDC48 (ath)  AtCDC48C (ath)  LOC4331645 (osa)  LOC4345563 (osa)  LOC4348731 (osa)  LOC7453784 (ppo)  LOC7467628 (ppo)  LOC7484424 (ppo)  LOC11432951 (mtr)  LOC18100167 (ppo)  LOC25483983 (mtr)  LOC25487843 (mtr)  LOC100776762 (gma)  LOC100783508 (gma)  LOC100791603 (gma)  LOC100798680 (gma)  LOC100799580 (gma)  LOC100805946 (gma)  LOC100806067 (gma)  LOC100814141 (gma)  LOC101246391 (sly)  LOC101259229 (sly)  LOC101265798 (sly)  LOC101266129 (sly)  LOC101266255 (sly)  LOC103829916 (bra)  LOC103842285 (bra)  LOC103847873 (bra)  LOC103855479 (bra)  LOC103859279 (bra)  LOC103870514 (bra)  LOC123049926 (tae)  LOC123053108 (tae)  LOC123058147 (tae)  LOC123065106 (tae)  LOC123065180 (tae)  LOC123065190 (tae)  LOC123074333 (tae)  LOC123084903 (tae)  LOC123084904 (tae)  LOC123092054 (tae)  LOC123092063 (tae)  LOC123092068 (tae)  LOC123092078 (tae)  LOC123092688 (tae)  LOC123093165 (tae)  LOC123093166 (tae)  LOC123098435 (tae)  LOC123098436 (tae)  LOC123098600 (tae)  LOC123123398 (tae)  LOC123136981 (tae)  LOC123137202 (tae)  LOC123172095 (tae)  LOC123181708 (tae)  LOC123181970 (tae)  LOC123183057 (tae)  LOC123184471 (tae)  LOC123399786 (hvu)  LOC123399795 (hvu)  LOC123425077 (hvu)  LOC123435769 (hvu)  LOC123435785 (hvu)  LOC123439645 (hvu)  LOC123439646 (hvu)  LOC123439647 (hvu)  LOC123439648 (hvu)  LOC123439651 (hvu)  LOC123441258 (hvu)  LOC123449462 (hvu)  LOC123449463 (hvu) 
Subcellular
localization
wolf
cyto 8,  chlo 1,  nucl 1,  cysk 1,  cysk_nucl 1  (predict for NP_190891.1)
Subcellular
localization
TargetP
other 8  (predict for NP_190891.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 8
ath04626 Plant-pathogen interaction 2
Genes directly connected with AtCDC48B on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
9.9 HSP70 heat shock protein 70 [detail] 820438
9.6 HSP90.1 heat shock-like protein [detail] 835341
8.9 AGO2 Argonaute family protein [detail] 840016
7.3 Tic20-IV translocon at the inner envelope membrane of chloroplasts 20-IV [detail] 827972
5.4 TIL temperature-induced lipocalin [detail] 835919
Coexpressed
gene list		 [Coexpressed gene list for AtCDC48B]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
251975_at
251975_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
251975_at
251975_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
251975_at
251975_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 824489      
Refseq ID (protein) NP_190891.1 


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