[][] ath   AT3G53260 Gene
functional annotation
Function   phenylalanine ammonia-lyase 2
GO BP
GO:0009800 [list] [network] cinnamic acid biosynthetic process  (5 genes)  IEA  
GO:0006559 [list] [network] L-phenylalanine catabolic process  (9 genes)  IEA  
GO:0009699 [list] [network] phenylpropanoid biosynthetic process  (89 genes)  TAS  
GO:0080167 [list] [network] response to karrikin  (128 genes)  IEP  
GO:0009611 [list] [network] response to wounding  (212 genes)  TAS  
GO:0006979 [list] [network] response to oxidative stress  (442 genes)  IEP  
GO:0006952 [list] [network] defense response  (1420 genes)  TAS  
GO CC
GO:0005829 [list] [network] cytosol  (3506 genes)  IDA  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  ISM  
GO MF
GO:0045548 [list] [network] phenylalanine ammonia-lyase activity  (4 genes)  IBA ISS TAS  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG ath00360 [list] [network] Phenylalanine metabolism (32 genes)
ath00940 [list] [network] Phenylpropanoid biosynthesis (166 genes)
Protein NP_190894.1 
BLAST NP_190894.1 
Orthologous [Ortholog page] LOC542258 (zma)PAL1 (ath)PAL4 (ath)PAL3 (ath)LOC4330034 (osa)LOC4330036 (osa)LOC4330037 (osa)LOC4330040 (osa)LOC4336415 (osa)LOC4338861 (osa)LOC7479878 (ppo)LOC7486485 (ppo)LOC9271676 (osa)LOC11414166 (mtr)LOC11429351 (mtr)LOC11434138 (mtr)LOC25487825 (mtr)LOC25499316 (mtr)LOC25499317 (mtr)LOC100233012 (vvi)LOC100240904 (vvi)LOC100241377 (vvi)LOC100241575 (vvi)LOC100245997 (vvi)LOC100251137 (vvi)LOC100252889 (vvi)LOC100256293 (vvi)LOC100263160 (vvi)LOC100266593 (vvi)LOC100273579 (zma)LOC100281042 (zma)LOC100281532 (zma)LOC100285115 (zma)PAL2.1 (gma)LOC100381820 (zma)LOC100384215 (zma)PAL3.1 (gma)PAL1.3 (gma)PAL1.2 (gma)PAL2.4 (gma)PAL2.3 (gma)PAL1.1 (gma)PAL2.2 (gma)LOC100853659 (vvi)LOC100854997 (vvi)LOC101243631 (sly)LOC101243656 (sly)PAL3 (sly)PAL5 (sly)LOC101246969 (sly)LOC101247265 (sly)PAL2 (sly)LOC101253989 (sly)LOC103627433 (zma)LOC103829920 (bra)LOC103841251 (bra)LOC103864245 (bra)LOC103865574 (bra)LOC103867229 (bra)LOC103870475 (bra)LOC112941051 (sly)
Subcellular
localization
wolf
chlo 4,  cyto 4,  nucl 1,  vacu 1  (predict for NP_190894.1)
Subcellular
localization
TargetP
other 9  (predict for NP_190894.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00940 Phenylpropanoid biosynthesis 14
ath00999 Biosynthesis of secondary metabolites - unclassified 5
ath00941 Flavonoid biosynthesis 4
ath00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 4
ath00130 Ubiquinone and other terpenoid-quinone biosynthesis 4
Genes directly connected with PAL2 on the network
coex z* Locus Function* Coexpression
detail
Entrez Gene ID*
19.9 PAL1 PHE ammonia lyase 1 [detail] 818280
11.2 C4H cinnamate-4-hydroxylase [detail] 817599
11.0 4CL1 4-coumarate:CoA ligase 1 [detail] 841593
6.0 ADT4 arogenate dehydratase 4 [detail] 823601
Coexpressed
gene list
[Coexpressed gene list for PAL2]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
251984_at
251984_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
251984_at
251984_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
251984_at
251984_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 824493    
Refseq ID (protein) NP_190894.1 


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