ATTED-II : GeneID search result

[←][→] ath At3g53410 Gene

functional annotation

Function

RING/U-box superfamily protein

Plant GARDEN Plant GARDEN JBrowse

GO BP

GO:0016567 [list] [network] protein ubiquitination

(434 genes)

IDA

GO CC

GO:0005634 [list] [network] nucleus

(10305 genes)

ISM

GO MF

GO:0004842 [list] [network] ubiquitin-protein transferase activity

(261 genes)

IDA

KEGG

Protein

NP_190909.1

BLAST

NP_190909.1

Orthologous

[Ortholog page] LOG2 (ath) LUL1 (ath) LOC4332287 (osa) LOC4348266 (osa) LOC7486475 (ppo) LOC11423275 (mtr) LOC18100200 (ppo) LOC25484017 (mtr) LOC100783831 (gma) LOC100789032 (gma) LOC100807343 (gma) LOC101247573 (sly) LOC101248607 (sly) LOC101258648 (sly) LOC101268819 (sly) LOC103829927 (bra) LOC103847936 (bra) LOC103850480 (bra) LOC103870520 (bra) LOC123085317 (tae) LOC123092726 (tae) LOC123098021 (tae) LOC123449124 (hvu)

Subcellular
localization
wolf

nucl 3, cyto 3, cyto_nucl 3, chlo 2

(predict for NP_190909.1)

Subcellular
localization
TargetP

other 6, mito 3

(predict for NP_190909.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

Genes directly connected with LUL2 on the network
coex z^*	Locus	Function^*	CoexViewer	Entrez Gene ID^*
6.6	AT5G66250	kinectin-like protein	[detail]	836757
6.3	AT1G47310	signal peptidase I	[detail]	841134
6.1	ATI2	mesoderm induction early response protein	[detail]	827659

Coexpressed
gene list

[Coexpressed gene list for LUL2]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

251959_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

251959_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

251959_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	824509
Refseq ID (protein)	NP_190909.1

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