[←][→] ath   At3g53700 Gene
functional annotation
Function   Pentatricopeptide repeat (PPR) superfamily protein      
GO BP
GO:0009793 [list] [network] embryo development ending in seed dormancy  (697 genes)  IMP  
GO CC
GO:0009507 [list] [network] chloroplast  (5004 genes)  HDA ISM  
GO MF
GO:0003729 [list] [network] mRNA binding  (1535 genes)  IDA  
KEGG
Protein NP_190938.1 
BLAST NP_190938.1 
Orthologous [Ortholog page] LOC4333379 (osa)  LOC7479044 (ppo)  LOC25484125 (mtr)  LOC100807932 (gma)  LOC101264147 (sly)  LOC103863383 (bra)  LOC123104937 (tae)  LOC123113238 (tae)  LOC123122746 (tae)  LOC123397125 (hvu) 
Subcellular
localization
wolf
chlo 7,  nucl 1,  plas 1,  extr 1,  cyto_nucl 1,  cysk_nucl 1  (predict for NP_190938.1)
Subcellular
localization
TargetP
chlo 8  (predict for NP_190938.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with MEE40 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
11.4 SVR7 pentatricopeptide (PPR) repeat-containing protein [detail] 827333
11.1 AT1G09900 Pentatricopeptide repeat (PPR-like) superfamily protein [detail] 837522
8.9 AT5G46580 pentatricopeptide (PPR) repeat-containing protein [detail] 834701
8.3 AT2G18940 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 816411
7.6 AT5G07900 Mitochondrial transcription termination factor family protein [detail] 830684
6.8 AT3G29230 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 822578
5.8 AT1G73710 Pentatricopeptide repeat (PPR) superfamily protein [detail] 843706
Coexpressed
gene list		 [Coexpressed gene list for MEE40]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
251936_at
251936_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
251936_at
251936_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
251936_at
251936_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 824537      
Refseq ID (protein) NP_190938.1 


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