[←][→] ath   At3g53890 Gene
functional annotation
Function   Ribosomal protein S21e    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0009658 [list] [network] chloroplast organization  (209 genes)  IGI  
GO:0006412 [list] [network] translation  (911 genes)  IEA  
GO CC
GO:0022627 [list] [network] cytosolic small ribosomal subunit  (93 genes)  HDA  
GO:0022626 [list] [network] cytosolic ribosome  (295 genes)  HDA  
GO:0005829 [list] [network] cytosol  (2559 genes)  HDA IDA  
GO:0005634 [list] [network] nucleus  (10305 genes)  IDA  
GO:0005737 [list] [network] cytoplasm  (13880 genes)  ISM  
GO MF
KEGG ath03010 [list] [network] Ribosome (359 genes)
Protein NP_001078280.1  NP_190957.1 
BLAST NP_001078280.1  NP_190957.1 
Orthologous [Ortholog page] AT5G27700 (ath)  LOC4332813 (osa)  LOC4333672 (osa)  LOC7481738 (ppo)  LOC11435884 (mtr)  LOC18098676 (ppo)  LOC25488134 (mtr)  LOC100499937 (gma)  LOC100780867 (gma)  LOC100817753 (gma)  LOC101244950 (sly)  LOC101245249 (sly)  LOC101254027 (sly)  LOC103829952 (bra)  LOC103841308 (bra)  LOC103854669 (bra)  LOC103863277 (bra)  LOC103874516 (bra)  LOC103875414 (bra)  LOC123043764 (tae)  LOC123051623 (tae)  LOC123085849 (tae)  LOC123091976 (tae)  LOC123097498 (tae)  LOC123187557 (tae)  LOC123424781 (hvu)  LOC123448626 (hvu) 
Subcellular
localization
wolf
mito 7,  nucl 1,  chlo 1,  plas 1,  cyto_nucl 1,  cysk_nucl 1  (predict for NP_001078280.1)
mito 7,  nucl 1,  chlo 1,  plas 1,  cyto_nucl 1,  cysk_nucl 1  (predict for NP_190957.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001078280.1)
other 8  (predict for NP_190957.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 19
Genes directly connected with AT3G53890 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
17.8 AT3G23390 Zinc-binding ribosomal protein family protein [detail] 821920
15.5 AT4G33865 Ribosomal protein S14p/S29e family protein [detail] 829529
15.0 AT4G31985 Ribosomal protein L39 family protein [detail] 829329
Coexpressed
gene list		 [Coexpressed gene list for AT3G53890]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
251921_at
251921_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
251921_at
251921_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
251921_at
251921_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 824556      
Refseq ID (protein) NP_001078280.1 
NP_190957.1 


The preparation time of this page was 0.1 [sec].