[←][→] ath   At3g53990 Gene
functional annotation
Function   Adenine nucleotide alpha hydrolases-like superfamily protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0034337 [list] [network] RNA folding  (3 genes)  IDA  
GO:0061077 [list] [network] chaperone-mediated protein folding  (18 genes)  IDA  
GO:0009408 [list] [network] response to heat  (287 genes)  IMP  
GO:0009409 [list] [network] response to cold  (472 genes)  IEP  
GO:0006979 [list] [network] response to oxidative stress  (545 genes)  IMP  
GO CC
GO:0009506 [list] [network] plasmodesma  (871 genes)  HDA  
GO:0005886 [list] [network] plasma membrane  (2529 genes)  HDA  
GO:0005829 [list] [network] cytosol  (2559 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10305 genes)  IDA  
GO:0005737 [list] [network] cytoplasm  (13880 genes)  IDA ISM  
GO MF
GO:0003676 [list] [network] nucleic acid binding  (3100 genes)  IDA  
KEGG
Protein NP_566991.2  NP_974427.1 
BLAST NP_566991.2  NP_974427.1 
Orthologous [Ortholog page] LOC4324861 (osa)  LOC4338972 (osa)  LOC7454965 (ppo)  LOC7486537 (ppo)  LOC11410639 (mtr)  LOC25491536 (mtr)  LOC25492551 (mtr)  LOC100306368 (gma)  LOC100306505 (gma)  LOC100306513 (gma)  LOC100499728 (gma)  LOC100499951 (gma)  LOC100527197 (gma)  LOC101264050 (sly)  LOC101264079 (sly)  LOC101264358 (sly)  LOC103829957 (bra)  LOC103841315 (bra)  LOC103863271 (bra)  LOC123058581 (tae)  LOC123135644 (tae)  LOC123170434 (tae)  LOC123440528 (hvu)  LOC123445689 (hvu) 
Subcellular
localization
wolf
cyto 4,  nucl 2,  chlo 1,  cysk_nucl 1,  mito 1,  extr 1,  cysk 1,  golg 1  (predict for NP_566991.2)
cyto 3,  nucl 2,  extr 2,  chlo 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for NP_974427.1)
Subcellular
localization
TargetP
other 8  (predict for NP_566991.2)
other 8  (predict for NP_974427.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04016 MAPK signaling pathway - plant 2
ath04070 Phosphatidylinositol signaling system 2
ath04626 Plant-pathogen interaction 2
Genes directly connected with AT3G53990 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
5.9 AT1G54410 dehydrin family protein [detail] 841883
5.6 ADF2 actin depolymerizing factor 2 [detail] 823743
5.4 ERD14 Dehydrin family protein [detail] 843950
Coexpressed
gene list		 [Coexpressed gene list for AT3G53990]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
251927_at
251927_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
251927_at
251927_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
251927_at
251927_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 824566      
Refseq ID (protein) NP_566991.2 
NP_974427.1 


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