[←][→] ath   AT3G54130 Gene
functional annotation
Function   Josephin family protein  
GO BP
GO:0016579 [list] [network] protein deubiquitination  (48 genes)  IBA  
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  IBA ISM  
GO MF
GO:0004843 [list] [network] thiol-dependent ubiquitin-specific protease activity  (42 genes)  IBA  
KEGG ath04141 [list] [network] Protein processing in endoplasmic reticulum (211 genes)
Protein NP_190981.1 
BLAST NP_190981.1 
Orthologous [Ortholog page] LOC4324808 (osa)  LOC7466041 (ppo)  LOC11428042 (mtr)  LOC100249311 (vvi)  LOC100273270 (zma)  LOC100283523 (zma)  LOC100776098 (gma)  LOC100808056 (gma)  LOC101258019 (sly)  LOC103841330 (bra)  LOC103863262 (bra) 
Subcellular
localization
wolf
chlo 4,  nucl 4,  nucl_plas 3,  cyto 1  (predict for NP_190981.1)
Subcellular
localization
TargetP
other 7  (predict for NP_190981.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03050 Proteasome 5
Genes directly connected with AT3G54130 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
5.4 TFIIB transcription factor IIB [detail] 818761
5.2 AIP2 RING/U-box superfamily protein [detail] 832215
5.1 AT1G15430 hypothetical protein (DUF1644) [detail] 838114
Coexpressed
gene list		 [Coexpressed gene list for AT3G54130]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
251904_at
251904_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
251904_at
251904_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
251904_at
251904_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 824580      
Refseq ID (protein) NP_190981.1 


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