[←][→] ath   AT3G54200 Gene
functional annotation
Function   Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family  
GO BP
GO CC
GO:0046658 [list] [network] anchored component of plasma membrane  (154 genes)  HDA  
GO:0009506 [list] [network] plasmodesma  (962 genes)  IDA  
GO:0005829 [list] [network] cytosol  (3506 genes)  HDA  
GO:0005886 [list] [network] plasma membrane  (3771 genes)  IDA  
GO:0016021 [list] [network] integral component of membrane  (4803 genes)  IEA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
KEGG
Protein NP_190988.1 
BLAST NP_190988.1 
Orthologous [Ortholog page] LOC7472500 (ppo)  LOC11442231 (mtr)  LOC100253618 (vvi)  LOC100777377 (gma)  LOC100793994 (gma)  LOC100802530 (gma)  LOC100804569 (gma)  LOC100806578 (gma)  LOC100811806 (gma)  LOC101268505 (sly)  LOC103829969 (bra)  LOC103841336 (bra)  LOC112999349 (gma) 
Subcellular
localization
wolf
cyto 3,  golg 2,  cyto_E.R. 2,  chlo 1,  E.R. 1,  golg_plas 1,  cyto_pero 1  (predict for NP_190988.1)
Subcellular
localization
TargetP
other 8  (predict for NP_190988.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00062 Fatty acid elongation 5
ath04626 Plant-pathogen interaction 2
Genes directly connected with AT3G54200 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.7 MYB96 myb domain protein 96 [detail] 836367
6.7 KCS1 3-ketoacyl-CoA synthase 1 [detail] 839395
6.0 KCS3 3-ketoacyl-CoA synthase 3 [detail] 837286
4.5 AT5G41810 Avr9/Cf-9 rapidly elicited protein [detail] 834186
Coexpressed
gene list		 [Coexpressed gene list for AT3G54200]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
251879_at
251879_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
251879_at
251879_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
251879_at
251879_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 824587      
Refseq ID (protein) NP_190988.1 


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