[][] ath   AT3G54400 Gene
functional annotation
Function   Eukaryotic aspartyl protease family protein
GO BP
GO:0030163 [list] [network] protein catabolic process  (603 genes)  IBA  
GO:0006508 [list] [network] proteolysis  (901 genes)  IBA  
GO CC
GO:0048046 [list] [network] apoplast  (443 genes)  IDA  
GO:0005618 [list] [network] cell wall  (685 genes)  IDA  
GO:0005576 [list] [network] extracellular region  (3363 genes)  ISM  
GO:0005829 [list] [network] cytosol  (3506 genes)  HDA  
GO MF
GO:0004190 [list] [network] aspartic-type endopeptidase activity  (68 genes)  IBA  
GO:0003677 [list] [network] DNA binding  (2280 genes)  IEA  
KEGG
Protein NP_191008.1 
BLAST NP_191008.1 
Orthologous [Ortholog page] AT5G07030 (ath)LOC4344165 (osa)LOC7486997 (ppo)LOC11407606 (mtr)LOC25482834 (mtr)LOC100191400 (zma)LOC100244589 (vvi)LOC100775446 (gma)LOC100784561 (gma)LOC100819698 (gma)LOC101266976 (sly)LOC103841353 (bra)LOC103847097 (bra)LOC103855713 (bra)LOC103863237 (bra)
Subcellular
localization
wolf
vacu 4,  chlo 2,  golg 2,  nucl 1,  plas 1,  extr 1,  nucl_plas 1  (predict for NP_191008.1)
Subcellular
localization
TargetP
scret 4  (predict for NP_191008.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT3G54400 on the network
coex z* Locus Function* Coexpression
detail
Entrez Gene ID*
6.8 sks4 SKU5 similar 4 [detail] 828290
5.9 AT3G49220 Plant invertase/pectin methylesterase inhibitor superfamily [detail] 824083
5.6 XTH16 xyloglucan endotransglucosylase/hydrolase 16 [detail] 821955
3.8 NPC6 non-specific phospholipase C6 [detail] 824021
Coexpressed
gene list
[Coexpressed gene list for AT3G54400]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
251899_at
251899_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
251899_at
251899_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
251899_at
251899_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 824606    
Refseq ID (protein) NP_191008.1 


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