[←][→] ath   AT3G54940 Gene
functional annotation
Function   Papain family cysteine protease  
GO BP
GO:0051603 [list] [network] proteolysis involved in cellular protein catabolic process  (524 genes)  IBA  
GO:0006508 [list] [network] proteolysis  (901 genes)  ISS  
GO CC
GO:0005764 [list] [network] lysosome  (45 genes)  IBA  
GO:0005615 [list] [network] extracellular space  (167 genes)  IBA  
GO:0005576 [list] [network] extracellular region  (3363 genes)  ISM  
GO MF
GO:0004197 [list] [network] cysteine-type endopeptidase activity  (66 genes)  IBA  
KEGG
Protein NP_001327920.1  NP_567010.5 
BLAST NP_001327920.1  NP_567010.5 
Orthologous [Ortholog page] CP3 (gma)  LOC4343231 (osa)  LOC7463461 (ppo)  LOC25484917 (mtr)  LOC100244387 (vvi)  LOC101266086 (sly)  LOC103841406 (bra)  LOC107305675 (zma) 
Subcellular
localization
wolf
extr 6,  chlo 1,  golg 1  (predict for NP_001327920.1)
chlo 4,  extr 3,  vacu 1,  golg 1  (predict for NP_567010.5)
Subcellular
localization
TargetP
scret 9  (predict for NP_001327920.1)
scret 9  (predict for NP_567010.5)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00940 Phenylpropanoid biosynthesis 2
ath00630 Glyoxylate and dicarboxylate metabolism 2
ath01200 Carbon metabolism 2
Genes directly connected with AT3G54940 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
18.4 PER1 1-cysteine peroxiredoxin 1 [detail] 841231
15.6 OLEO2 oleosin 2 [detail] 834040
13.6 AT2G28490 RmlC-like cupins superfamily protein [detail] 817397
9.4 AT2G21720 ArgH (DUF639) [detail] 816709
9.2 ATOEP16-2 Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein [detail] 827308
8.7 AT3G01570 Oleosin family protein [detail] 821106
8.5 ABI3 AP2/B3-like transcriptional factor family protein [detail] 822061
4.3 ICL isocitrate lyase [detail] 821726
Coexpressed
gene list		 [Coexpressed gene list for AT3G54940]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
251838_at
251838_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
251838_at
251838_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
251838_at
251838_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 824659      
Refseq ID (protein) NP_001327920.1 
NP_567010.5 


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