[←][→] ath   AT3G55580 Gene
functional annotation
Function   Regulator of chromosome condensation (RCC1) family protein  
GO BP
GO:0071497 [list] [network] cellular response to freezing  (3 genes)  IMP  
GO:1901141 [list] [network] regulation of lignin biosynthetic process  (9 genes)  IMP  
GO:0009631 [list] [network] cold acclimation  (59 genes)  IMP  
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  IDA  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  ISM  
GO MF
GO:0042393 [list] [network] histone binding  (72 genes)  IDA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_191117.1 
BLAST NP_191117.1 
Orthologous [Ortholog page] AT3G53830 (ath)  LOC4327469 (osa)  LOC7468825 (ppo)  LOC11422591 (mtr)  LOC25498574 (mtr)  LOC100241084 (vvi)  LOC100247802 (vvi)  LOC100274159 (zma)  LOC100776320 (gma)  LOC100778718 (gma)  LOC100778841 (gma)  LOC100781488 (gma)  LOC100807837 (gma)  LOC100819003 (gma)  LOC101248324 (sly)  LOC101249643 (sly)  LOC103636503 (zma)  LOC103841470 (bra)  LOC103863279 (bra)  LOC107275700 (osa) 
Subcellular
localization
wolf
nucl 10  (predict for NP_191117.1)
Subcellular
localization
TargetP
other 8  (predict for NP_191117.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04712 Circadian rhythm - plant 4
Genes directly connected with AT3G55580 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.3 BBX18 B-box zinc finger family protein [detail] 816671
5.6 AT5G64170 dentin sialophosphoprotein-like protein [detail] 836538
5.5 CCA1 circadian clock associated 1 [detail] 819296
Coexpressed
gene list		 [Coexpressed gene list for AT3G55580]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
251793_at
251793_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
251793_at
251793_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
251793_at
251793_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 824723      
Refseq ID (protein) NP_191117.1 


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