[←][→] ath   At3g55850 Gene
functional annotation
Function   Amidohydrolase family    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0009704 [list] [network] de-etiolation  (17 genes)  IEP  
GO:0010218 [list] [network] response to far red light  (48 genes)  IEP IMP  
GO:0009845 [list] [network] seed germination  (99 genes)  IEP  
GO CC
GO:0048471 [list] [network] perinuclear region of cytoplasm  (12 genes)  IDA  
GO:0005783 [list] [network] endoplasmic reticulum  (856 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5004 genes)  ISM  
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO:0005737 [list] [network] cytoplasm  (13880 genes)  ISM  
GO MF
GO:0016810 [list] [network] hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds  (101 genes)  IEA  
KEGG
Protein NP_001319763.1  NP_001326016.1  NP_001326017.1  NP_001326018.1  NP_567027.2  NP_974445.2 
BLAST NP_001319763.1  NP_001326016.1  NP_001326017.1  NP_001326018.1  NP_567027.2  NP_974445.2 
Orthologous [Ortholog page] LOC4325749 (osa)  LOC7460241 (ppo)  LOC11421128 (mtr)  LOC100786364 (gma)  LOC100799799 (gma)  LOC101256311 (sly)  LOC103863134 (bra)  LOC123072530 (tae)  LOC123080748 (tae)  LOC123427356 (hvu)  LOC123442118 (hvu)  LOC123445542 (hvu) 
Subcellular
localization
wolf
chlo 4,  cyto 4,  nucl_plas 1,  nucl 1,  plas 1  (predict for NP_001319763.1)
cyto 5,  chlo 2,  mito 2,  chlo_mito 2  (predict for NP_001326016.1)
extr 3,  chlo 1,  cyto 1,  vacu 1,  E.R. 1,  E.R._vacu 1,  cyto_E.R. 1  (predict for NP_001326017.1)
cyto 6,  mito 2,  chlo 1,  mito_plas 1  (predict for NP_001326018.1)
extr 3,  chlo 1,  cyto 1,  vacu 1,  E.R. 1,  E.R._vacu 1,  cyto_E.R. 1  (predict for NP_567027.2)
E.R._plas 4,  plas 3,  E.R. 3,  nucl 1,  mito 1  (predict for NP_974445.2)
Subcellular
localization
TargetP
other 7  (predict for NP_001319763.1)
other 7  (predict for NP_001326016.1)
scret 9  (predict for NP_001326017.1)
other 7  (predict for NP_001326018.1)
scret 9  (predict for NP_567027.2)
scret 9  (predict for NP_974445.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with LAF3 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
8.5 AT3G12100 Cation efflux family protein [detail] 820384
8.0 NHX5 sodium hydrogen exchanger 5 [detail] 841878
6.9 AT1G48430 Dihydroxyacetone kinase [detail] 841264
5.9 AT3G16700 Fumarylacetoacetate (FAA) hydrolase family [detail] 820922
3.5 AT1G20380 Prolyl oligopeptidase family protein [detail] 838626
Coexpressed
gene list		 [Coexpressed gene list for LAF3]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
251717_at
251717_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
251717_at
251717_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
251717_at
251717_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 824751      
Refseq ID (protein) NP_001319763.1 
NP_001326016.1 
NP_001326017.1 
NP_001326018.1 
NP_567027.2 
NP_974445.2 


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