[←][→] ath   AT3G55980 Gene
functional annotation
Function   salt-inducible zinc finger 1  
GO BP
GO:0010200 [list] [network] response to chitin  (142 genes)  IBA IEP  
GO:0071456 [list] [network] cellular response to hypoxia  (238 genes)  HEP  
GO:0006355 [list] [network] regulation of transcription, DNA-templated  (1984 genes)  TAS  
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  IEA ISM  
GO MF
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1599 genes)  ISS  
GO:0003677 [list] [network] DNA binding  (2280 genes)  IEA  
GO:0046872 [list] [network] metal ion binding  (3180 genes)  IEA  
KEGG
Protein NP_001326199.1  NP_567030.1 
BLAST NP_001326199.1  NP_567030.1 
Orthologous [Ortholog page] CZF1 (ath)  AT5G58620 (ath)  LOC7467993 (ppo)  LOC7481474 (ppo)  LOC7490324 (ppo)  LOC11408632 (mtr)  LOC11415853 (mtr)  LOC11423139 (mtr)  LOC11429482 (mtr)  LOC100246707 (vvi)  LOC100265670 (vvi)  LOC100783376 (gma)  LOC100787878 (gma)  LOC100795085 (gma)  LOC100806121 (gma)  LOC100812481 (gma)  LOC100819521 (gma)  LOC101257277 (sly)  LOC101258155 (sly)  LOC103841501 (bra)  LOC103845296 (bra)  LOC103857910 (bra)  LOC103866976 (bra) 
Subcellular
localization
wolf
nucl 6,  golg 1,  cyto 1,  mito 1,  vacu 1,  E.R. 1,  golg_plas 1,  E.R._vacu 1,  cyto_E.R. 1  (predict for NP_001326199.1)
chlo 4,  nucl 3,  cyto 1,  nucl_plas 1  (predict for NP_567030.1)
Subcellular
localization
TargetP
chlo 5  (predict for NP_001326199.1)
other 6  (predict for NP_567030.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04016 MAPK signaling pathway - plant 2
Genes directly connected with SZF1 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
15.3 DIC2 dicarboxylate carrier 2 [detail] 828559
14.9 AT4G29780 nuclease [detail] 829100
14.4 STZ salt tolerance zinc finger [detail] 839666
13.7 WRKY33 WRKY DNA-binding protein 33 [detail] 818429
13.5 CZF1 zinc finger (CCCH-type) family protein [detail] 818605
13.4 WRKY40 WRKY DNA-binding protein 40 [detail] 844423
13.0 AT1G07135 glycine-rich protein [detail] 837224
12.1 ACS6 1-aminocyclopropane-1-carboxylic acid (acc) synthase 6 [detail] 826730
11.1 ERF6 ethylene responsive element binding factor 6 [detail] 827463
10.7 ATL2 TOXICOS EN LEVADURA 2 [detail] 820924
10.2 AT2G39650 cruciferin (DUF506) [detail] 818548
9.8 AT3G56880 VQ motif-containing protein [detail] 824855
9.0 CYP707A3 cytochrome P450, family 707, subfamily A, polypeptide 3 [detail] 834570
7.6 AT3G59080 Eukaryotic aspartyl protease family protein [detail] 825077
Coexpressed
gene list		 [Coexpressed gene list for SZF1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
251745_at
251745_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
251745_at
251745_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
251745_at
251745_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 824764      
Refseq ID (protein) NP_001326199.1 
NP_567030.1 


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