[←][→] ath   At3g56240 Gene
functional annotation
Function   copper chaperone    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0006878 [list] [network] cellular copper ion homeostasis  (6 genes)  IMP TAS  
GO:0034755 [list] [network] iron ion transmembrane transport  (11 genes)  IGI  
GO:0007568 [list] [network] aging  (67 genes)  IEP  
GO:0046686 [list] [network] response to cadmium ion  (90 genes)  IEP  
GO:0000302 [list] [network] response to reactive oxygen species  (141 genes)  IGI  
GO CC
GO:0005829 [list] [network] cytosol  (2559 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5004 genes)  HDA  
GO:0005737 [list] [network] cytoplasm  (13880 genes)  ISM  
GO MF
GO:0016531 [list] [network] copper chaperone activity  (5 genes)  ISS  
GO:0046872 [list] [network] metal ion binding  (1000 genes)  IEA  
KEGG
Protein NP_001326128.1  NP_001326129.1  NP_191183.1 
BLAST NP_001326128.1  NP_001326129.1  NP_191183.1 
Orthologous [Ortholog page] CCH (sly)  AT3G05220 (ath)  ATX1 (ath)  LOC4344925 (osa)  LOC7477180 (ppo)  LOC7494892 (ppo)  LOC9266714 (osa)  LOC11411763 (mtr)  LOC11437811 (mtr)  LOC25486087 (mtr)  LOC25489289 (mtr)  LOC100306415 (gma)  LOC100799342 (gma)  LOC101247578 (sly)  LOC103841533 (bra)  LOC103850556 (bra)  LOC103855579 (bra)  LOC103859083 (bra)  LOC103870452 (bra)  LOC123148856 (tae)  LOC123159353 (tae)  LOC123166691 (tae)  LOC123167505 (tae)  LOC123408376 (hvu)  LOC123410004 (hvu) 
Subcellular
localization
wolf
chlo 7,  cyto 1,  mito 1,  extr 1,  cyto_nucl 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for NP_001326128.1)
chlo 6,  cyto 3,  mito 1,  extr 1  (predict for NP_001326129.1)
chlo 7,  cyto 1,  mito 1,  extr 1,  cyto_nucl 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for NP_191183.1)
Subcellular
localization
TargetP
scret 4,  other 4  (predict for NP_001326128.1)
other 7  (predict for NP_001326129.1)
scret 4,  other 4  (predict for NP_191183.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with CCH on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
11.9 YSL2 YELLOW STRIPE like 2 [detail] 832509
9.4 FSD1 Fe superoxide dismutase 1 [detail] 828613
7.8 COPT2 copper transporter 2 [detail] 823843
6.6 AT2G25625 histone deacetylase-like protein [detail] 817103
5.9 YSL3 YELLOW STRIPE like 3 [detail] 835437
Coexpressed
gene list		 [Coexpressed gene list for CCH]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
251733_at
251733_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
251733_at
251733_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
251733_at
251733_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 824790      
Refseq ID (protein) NP_001326128.1 
NP_001326129.1 
NP_191183.1 


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