[][] ath   AT3G56650 Gene
functional annotation
Function   thylakoid lumenal protein (Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein)
GO BP
GO:0015979 [list] [network] photosynthesis  (206 genes)  IEA  
GO CC
GO:0009654 [list] [network] photosystem II oxygen evolving complex  (21 genes)  IEA  
GO:0009543 [list] [network] chloroplast thylakoid lumen  (59 genes)  IDA IEA  
GO:0019898 [list] [network] extrinsic component of membrane  (62 genes)  IEA  
GO:0031977 [list] [network] thylakoid lumen  (72 genes)  IDA  
GO:0009534 [list] [network] chloroplast thylakoid  (474 genes)  IDA  
GO:0009579 [list] [network] thylakoid  (543 genes)  IDA  
GO:0009570 [list] [network] chloroplast stroma  (750 genes)  IDA  
GO:0005829 [list] [network] cytosol  (3506 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5095 genes)  HDA IDA ISM  
GO MF
GO:0005509 [list] [network] calcium ion binding  (242 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_191224.1 
BLAST NP_191224.1 
Orthologous [Ortholog page] LOC4327544 (osa)LOC7479651 (ppo)LOC11417401 (mtr)LOC100246497 (vvi)LOC100278794 (zma)LOC100795124 (gma)LOC100813771 (gma)LOC101248113 (sly)LOC103863093 (bra)
Subcellular
localization
wolf
chlo 7,  mito 3  (predict for NP_191224.1)
Subcellular
localization
TargetP
chlo 9  (predict for NP_191224.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with PPD6 on the network
coex z* Locus Function* Coexpression
detail
Entrez Gene ID*
8.6 AT2G44920 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 819101
8.3 AT5G53490 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 835431
8.0 AT1G20810 FKBP-like peptidyl-prolyl cis-trans isomerase family protein [detail] 838672
7.9 AT1G12250 Pentapeptide repeat-containing protein [detail] 837778
7.3 AT1G14270 CAAX amino terminal protease family protein [detail] 837988
7.3 CYP38 cyclophilin 38 [detail] 821137
Coexpressed
gene list
[Coexpressed gene list for PPD6]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
251701_at
251701_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
251701_at
251701_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
251701_at
251701_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 824832    
Refseq ID (protein) NP_191224.1 


The preparation time of this page was 0.2 [sec].