[←][→] ath   At3g56720 Gene
functional annotation
Function   pre-mRNA-splicing factor    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0016192 [list] [network] vesicle-mediated transport  (261 genes)  IEA  
GO:0031327 [list] [network] negative regulation of cellular biosynthetic process  (320 genes)  IEA  
GO:0051641 [list] [network] cellular localization  (648 genes)  IEA  
GO:0009266 [list] [network] response to temperature stimulus  (843 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
KEGG
Protein NP_001190106.1  NP_001190107.1  NP_001326861.1  NP_001326862.1  NP_001326863.1  NP_001326864.1  NP_191231.2 
BLAST NP_001190106.1  NP_001190107.1  NP_001326861.1  NP_001326862.1  NP_001326863.1  NP_001326864.1  NP_191231.2 
Orthologous [Ortholog page] LOC4348955 (osa)  LOC7464095 (ppo)  LOC7496082 (ppo)  LOC11424300 (mtr)  LOC100798812 (gma)  LOC100806966 (gma)  LOC101247793 (sly)  LOC103841571 (bra)  LOC123044481 (tae)  LOC123052341 (tae)  LOC123085196 (tae)  LOC123092801 (tae)  LOC123098094 (tae)  LOC123188190 (tae)  LOC123425626 (hvu)  LOC123449180 (hvu) 
Subcellular
localization
wolf
nucl 10  (predict for NP_001190106.1)
nucl 10  (predict for NP_001190107.1)
nucl 9  (predict for NP_001326861.1)
nucl 9  (predict for NP_001326862.1)
nucl 9  (predict for NP_001326863.1)
nucl 10  (predict for NP_001326864.1)
nucl 10  (predict for NP_191231.2)
Subcellular
localization
TargetP
other 8  (predict for NP_001190106.1)
other 8  (predict for NP_001190107.1)
other 8  (predict for NP_001326861.1)
other 8  (predict for NP_001326862.1)
other 8  (predict for NP_001326863.1)
other 8  (predict for NP_001326864.1)
other 8  (predict for NP_191231.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04712 Circadian rhythm - plant 2
ath04075 Plant hormone signal transduction 2
Genes directly connected with AT3G56720 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
10.2 BET9 bromodomain and extraterminal domain protein 9 [detail] 831277
7.3 AT3G28370 spindle assembly checkpoint component [detail] 822466
7.0 AT1G33970 P-loop containing nucleoside triphosphate hydrolases superfamily protein [detail] 840294
6.4 HSF3 heat shock factor 3 [detail] 831545
Coexpressed
gene list		 [Coexpressed gene list for AT3G56720]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
246343_at
246343_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
246343_at
246343_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
246343_at
246343_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 824839      
Refseq ID (protein) NP_001190106.1 
NP_001190107.1 
NP_001326861.1 
NP_001326862.1 
NP_001326863.1 
NP_001326864.1 
NP_191231.2 


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