[←][→] ath   At3g56880 Gene
functional annotation
Function   VQ motif-containing protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0071215 [list] [network] cellular response to abscisic acid stimulus  (230 genes)  IEA  
GO:0071456 [list] [network] cellular response to hypoxia  (241 genes)  HEP  
GO:0010200 [list] [network] response to chitin  (304 genes)  IEA  
GO:0009751 [list] [network] response to salicylic acid  (438 genes)  IEA  
GO:0002376 [list] [network] immune system process  (453 genes)  IEA  
GO:0009409 [list] [network] response to cold  (472 genes)  IEA  
GO:0010243 [list] [network] response to organonitrogen compound  (591 genes)  IEA  
GO:0009651 [list] [network] response to salt stress  (607 genes)  IEA  
GO:0009753 [list] [network] response to jasmonic acid  (611 genes)  IEA  
GO:0050832 [list] [network] defense response to fungus  (705 genes)  IEA  
GO:0031347 [list] [network] regulation of defense response  (749 genes)  IEA  
GO:0009611 [list] [network] response to wounding  (816 genes)  IEA  
GO:0009755 [list] [network] hormone-mediated signaling pathway  (904 genes)  IEA  
GO:0042742 [list] [network] defense response to bacterium  (980 genes)  IEA  
GO:0009414 [list] [network] response to water deprivation  (1006 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
KEGG
Protein NP_191247.1 
BLAST NP_191247.1 
Orthologous [Ortholog page] CAMBP25 (ath)  LOC4349677 (osa)  LOC4351394 (osa)  LOC7464058 (ppo)  LOC7479642 (ppo)  LOC11415019 (mtr)  LOC100782392 (gma)  LOC100790912 (gma)  LOC101251527 (sly)  LOC101259793 (sly)  LOC103841587 (bra)  LOC103863082 (bra)  LOC103865857 (bra)  LOC112938650 (osa)  LOC123065350 (tae)  LOC123106853 (tae)  LOC123115959 (tae)  LOC123124605 (tae)  LOC123395856 (hvu)  LOC123439802 (hvu) 
Subcellular
localization
wolf
nucl 10  (predict for NP_191247.1)
Subcellular
localization
TargetP
other 6,  chlo 3  (predict for NP_191247.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04626 Plant-pathogen interaction 2
ath04016 MAPK signaling pathway - plant 2
Genes directly connected with AT3G56880 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
10.0 SZF1 salt-inducible zinc finger 1 [detail] 824764
10.0 AT4G29780 nuclease [detail] 829100
9.9 DIC2 dicarboxylate carrier 2 [detail] 828559
8.7 CAMBP25 calmodulin (CAM)-binding protein of 25 kDa [detail] 818701
6.6 DOF1 DOF zinc finger protein 1 [detail] 841595
4.6 LBD11 LOB domain-containing protein 11 [detail] 817398
Coexpressed
gene list		 [Coexpressed gene list for AT3G56880]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
246289_at
246289_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
246289_at
246289_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
246289_at
246289_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 824855      
Refseq ID (protein) NP_191247.1 


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