[][] ath   AT3G57150 Gene
functional annotation
Function   homologue of NAP57
GO BP
GO:0000495 [list] [network] box H/ACA snoRNA 3'-end processing  (1 genes)  IBA  
GO:0031120 [list] [network] snRNA pseudouridine synthesis  (2 genes)  IBA  
GO:1990481 [list] [network] mRNA pseudouridine synthesis  (3 genes)  IBA  
GO:0031118 [list] [network] rRNA pseudouridine synthesis  (5 genes)  IBA  
GO CC
GO:0031429 [list] [network] box H/ACA snoRNP complex  (7 genes)  IBA  
GO:0005730 [list] [network] nucleolus  (477 genes)  IDA  
GO:0009506 [list] [network] plasmodesma  (962 genes)  IDA  
GO:0005829 [list] [network] cytosol  (3506 genes)  HDA IDA RCA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0009982 [list] [network] pseudouridine synthase activity  (20 genes)  IBA ISS TAS  
GO:0003723 [list] [network] RNA binding  (1790 genes)  IEA  
KEGG ath03008 [list] [network] Ribosome biogenesis in eukaryotes (98 genes)
Protein NP_191274.1 
BLAST NP_191274.1 
Orthologous [Ortholog page] LOC4332935 (osa)LOC4344029 (osa)LOC7458946 (ppo)LOC7473584 (ppo)LOC25492817 (mtr)LOC100258019 (vvi)LOC100502498 (zma)LOC100780706 (gma)LOC100806355 (gma)LOC101255259 (sly)LOC103649956 (zma)LOC103830088 (bra)LOC103853527 (bra)LOC107521957 (zma)
Subcellular
localization
wolf
cyto 7,  nucl 2  (predict for NP_191274.1)
Subcellular
localization
TargetP
other 9  (predict for NP_191274.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 6
Genes directly connected with NAP57 on the network
coex z* Locus Function* Coexpression
detail
Entrez Gene ID*
19.4 AT3G05060 NOP56-like pre RNA processing ribonucleoprotein [detail] 819668
17.7 NOP56 NOP56-like pre RNA processing ribonucleoprotein [detail] 842063
13.8 AT5G27120 NOP56-like pre RNA processing ribonucleoprotein [detail] 832770
13.2 NSN1 GTP-binding family protein [detail] 819890
11.0 AT3G12860 NOP56-like pre RNA processing ribonucleoprotein [detail] 820468
10.9 NUC-L1 nucleolin like 1 [detail] 841314
7.8 AT5G27330 Prefoldin chaperone subunit family protein [detail] 832791
Coexpressed
gene list
[Coexpressed gene list for NAP57]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
251667_at
251667_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
251667_at
251667_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
251667_at
251667_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 824882    
Refseq ID (protein) NP_191274.1 


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