[←][→] ath   At3g57520 Gene
functional annotation
Function   seed imbibition 2    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0034484 [list] [network] raffinose catabolic process  (1 genes)  IDA  
GO:0006979 [list] [network] response to oxidative stress  (545 genes)  IEP  
GO CC
GO:0009506 [list] [network] plasmodesma  (871 genes)  HDA  
GO:0005737 [list] [network] cytoplasm  (13880 genes)  ISM  
GO MF
GO:0047274 [list] [network] galactinol-sucrose galactosyltransferase activity  (5 genes)  IDA IEA  
GO:0052692 [list] [network] raffinose alpha-galactosidase activity  (5 genes)  IDA  
KEGG ath00052 [list] [network] Galactose metabolism (57 genes)
Protein NP_191311.1  NP_850715.1  NP_974451.1 
BLAST NP_191311.1  NP_850715.1  NP_974451.1 
Orthologous [Ortholog page] LOC4342703 (osa)  LOC7468974 (ppo)  LOC7473630 (ppo)  LOC9271916 (osa)  LOC25483406 (mtr)  LOC25499041 (mtr)  LOC100682404 (tae)  LOC100807861 (gma)  LOC101254878 (sly)  LOC103841656 (bra)  LOC123442945 (hvu) 
Subcellular
localization
wolf
chlo 8,  nucl 1  (predict for NP_191311.1)
chlo 7,  nucl 1,  cyto 1,  cysk 1,  nucl_plas 1  (predict for NP_850715.1)
chlo 6,  cyto 3,  chlo_mito 3  (predict for NP_974451.1)
Subcellular
localization
TargetP
other 6  (predict for NP_191311.1)
other 6  (predict for NP_850715.1)
other 6  (predict for NP_974451.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00052 Galactose metabolism 2
ath00053 Ascorbate and aldarate metabolism 2
ath00562 Inositol phosphate metabolism 2
ath01250 Biosynthesis of nucleotide sugars 2
Genes directly connected with SIP2 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
13.3 ERD5 Methylenetetrahydrofolate reductase family protein [detail] 822833
10.2 MIOX2 myo-inositol oxygenase 2 [detail] 816499
9.3 ACR9 ACT domain-containing protein [detail] 818542
9.0 GDPD2 PLC-like phosphodiesterases superfamily protein [detail] 834110
8.8 AT1G30820 CTP synthase family protein [detail] 839964
5.2 AT5G18840 Major facilitator superfamily protein [detail] 832002
4.5 AT4G36820 calcium uniporter (DUF607) [detail] 829835
Coexpressed
gene list		 [Coexpressed gene list for SIP2]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
251642_at
251642_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
251642_at
251642_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
251642_at
251642_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 824919      
Refseq ID (protein) NP_191311.1 
NP_850715.1 
NP_974451.1 


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