[←][→] ath   At3g57890 Gene
functional annotation
Function   Tubulin binding cofactor C domain-containing protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0030163 [list] [network] protein catabolic process  (321 genes)  IEA  
GO:0048589 [list] [network] developmental growth  (1060 genes)  IEA  
GO:0044248 [list] [network] cellular catabolic process  (1086 genes)  IEA  
GO:0048869 [list] [network] cellular developmental process  (1335 genes)  IEA  
GO CC
GO:0005829 [list] [network] cytosol  (2559 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
KEGG
Protein NP_001190120.1  NP_567059.1 
BLAST NP_001190120.1  NP_567059.1 
Orthologous [Ortholog page] AT2G42230 (ath)  LOC4328604 (osa)  LOC4341531 (osa)  LOC7468946 (ppo)  LOC11441474 (mtr)  LOC18099873 (ppo)  LOC25483469 (mtr)  LOC100780410 (gma)  LOC100800780 (gma)  LOC100801317 (gma)  LOC100819271 (gma)  LOC101261178 (sly)  LOC103830124 (bra)  LOC103841690 (bra)  LOC103863020 (bra)  LOC103866618 (bra)  LOC123132646 (tae)  LOC123136740 (tae)  LOC123144223 (tae)  LOC123148473 (tae)  LOC123157105 (tae)  LOC123165149 (tae)  LOC123401787 (hvu)  LOC123408466 (hvu) 
Subcellular
localization
wolf
cyto 4,  nucl 4,  chlo 1,  plas 1,  vacu 1  (predict for NP_001190120.1)
cyto 5,  nucl 4,  chlo 1,  plas 1  (predict for NP_567059.1)
Subcellular
localization
TargetP
other 6,  chlo 6  (predict for NP_001190120.1)
other 6,  chlo 6  (predict for NP_567059.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 3
ath04141 Protein processing in endoplasmic reticulum 2
ath03050 Proteasome 2
Genes directly connected with AT3G57890 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
9.4 TPLATE ARM repeat superfamily protein [detail] 821081
8.2 DL3 dynamin-like 3 [detail] 842251
7.9 AT2G17190 ubiquitin family protein [detail] 816224
6.6 LPAT2 lysophosphatidyl acyltransferase 2 [detail] 824934
6.4 AT3G05545 RING/U-box superfamily protein [detail] 819720
6.2 SNX2a sorting nexin 2A [detail] 835957
Coexpressed
gene list		 [Coexpressed gene list for AT3G57890]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
251562_at
251562_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
251562_at
251562_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
251562_at
251562_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 824958      
Refseq ID (protein) NP_001190120.1 
NP_567059.1 


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