[][] ath   AT3G58530 Gene
functional annotation
Function   RNI-like superfamily protein
GO BP
GO:0031146 [list] [network] SCF-dependent proteasomal ubiquitin-dependent protein catabolic process  (66 genes)  IBA  
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process  (436 genes)  IBA  
GO CC
GO:0019005 [list] [network] SCF ubiquitin ligase complex  (68 genes)  IBA  
GO:0005829 [list] [network] cytosol  (3506 genes)  IDA  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  ISM  
GO MF
GO:0004842 [list] [network] ubiquitin-protein transferase activity  (434 genes)  IBA  
KEGG
Protein NP_567069.1 
BLAST NP_567069.1 
Orthologous [Ortholog page] LOC7479508 (ppo)LOC9267245 (osa)LOC25483581 (mtr)LOC100243447 (vvi)LOC100818866 (gma)LOC101251292 (sly)LOC103626911 (zma)LOC103841731 (bra)LOC103862979 (bra)
Subcellular
localization
wolf
nucl 4,  cyto 4,  chlo 1  (predict for NP_567069.1)
Subcellular
localization
TargetP
other 9  (predict for NP_567069.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT3G58530 on the network
coex z* Locus Function* Coexpression
detail
Entrez Gene ID*
5.1 AT5G10710 centromere protein O [detail] 830936
5.0 AT4G33060 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein [detail] 829443
4.8 AT1G48550 Vacuolar protein sorting-associated protein 26 [detail] 841276
4.7 DIM1B Ribosomal RNA adenine dimethylase family protein [detail] 836768
4.2 AT1G02740 MRG family protein [detail] 839455
Coexpressed
gene list
[Coexpressed gene list for AT3G58530]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
251532_at
251532_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
251532_at
251532_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
251532_at
251532_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 825022    
Refseq ID (protein) NP_567069.1 


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