[←][→] ath   AT3G58740 Gene
functional annotation
Function   citrate synthase 1  
GO BP
GO:0006099 [list] [network] tricarboxylic acid cycle  (54 genes)  IBA IEA  
GO:0005975 [list] [network] carbohydrate metabolic process  (995 genes)  IBA  
GO CC
GO:0005759 [list] [network] mitochondrial matrix  (143 genes)  IBA  
GO:0005777 [list] [network] peroxisome  (325 genes)  ISS  
GO:0005829 [list] [network] cytosol  (3506 genes)  RCA  
GO:0005739 [list] [network] mitochondrion  (4405 genes)  ISM  
GO MF
GO:0004108 [list] [network] citrate (Si)-synthase activity  (5 genes)  IBA  
KEGG ath00020 [list] [network] Citrate cycle (TCA cycle) (63 genes)
ath00630 [list] [network] Glyoxylate and dicarboxylate metabolism (78 genes)
ath01200 [list] [network] Carbon metabolism (273 genes)
ath01210 [list] [network] 2-Oxocarboxylic acid metabolism (74 genes)
ath01230 [list] [network] Biosynthesis of amino acids (251 genes)
Protein NP_191433.1 
BLAST NP_191433.1 
Orthologous [Ortholog page] CSY3 (ath)  CSY2 (ath)  LOC4328812 (osa)  LOC7466294 (ppo)  LOC7467622 (ppo)  LOC11437065 (mtr)  LOC100170739 (gma)  LOC100255795 (vvi)  LOC100275174 (zma)  LOC101258079 (sly)  LOC101260902 (sly)  LOC103830182 (bra)  LOC103841750 (bra)  LOC103866666 (bra) 
Subcellular
localization
wolf
cyto 6,  nucl 1,  chlo 1,  mito 1,  pero 1,  chlo_mito 1,  cysk_nucl 1,  nucl_plas 1  (predict for NP_191433.1)
Subcellular
localization
TargetP
other 3  (predict for NP_191433.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with CSY1 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
8.1 LEC1 Histone superfamily protein [detail] 838800
8.0 AT5G38170 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein [detail] 833797
7.9 AT4G33600 transmembrane protein [detail] 829500
7.5 KCS18 3-ketoacyl-CoA synthase 18 [detail] 829603
6.3 AT4G11180 Disease resistance-responsive (dirigent-like protein) family protein [detail] 826720
6.2 AT1G62060 transmembrane protein [detail] 842502
6.2 AT1G62070 hypothetical protein [detail] 842503
5.9 AT5G07260 START (StAR-related lipid-transfer) lipid-binding domain-containing protein [detail] 830617
5.7 RGP4 reversibly glycosylated polypeptide 4 [detail] 835147
5.7 DPBF2 Basic-leucine zipper (bZIP) transcription factor family protein [detail] 823571
4.8 NF-YB6 nuclear factor Y, subunit B6 [detail] 834818
Coexpressed
gene list		 [Coexpressed gene list for CSY1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
251540_at
251540_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
251540_at
251540_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
251540_at
251540_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 825043      
Refseq ID (protein) NP_191433.1 


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