[←][→] ath   At3g58780 Gene
functional annotation
Function   K-box region and MADS-box transcription factor family protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0010047 [list] [network] fruit dehiscence  (13 genes)  IMP  
GO:0048481 [list] [network] plant ovule development  (60 genes)  IMP  
GO:0048440 [list] [network] carpel development  (86 genes)  IMP  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
GO:0000976 [list] [network] transcription cis-regulatory region binding  (708 genes)  IPI  
GO:0003677 [list] [network] DNA binding  (1277 genes)  ISS  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1576 genes)  ISS  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG
Protein NP_001078311.1  NP_001190130.1  NP_001325709.1  NP_001325710.1  NP_191437.1 
BLAST NP_001078311.1  NP_001190130.1  NP_001325709.1  NP_001325710.1  NP_191437.1 
Orthologous [Ortholog page] AG1 (sly)  TAGL1 (sly)  AGL11 (sly)  LOC732595 (gma)  LOC780638 (tae)  LOC780644 (tae)  SHP2 (ath)  STK (ath)  AG (ath)  LOC4324888 (osa)  LOC4351753 (osa)  LOC7470186 (ppo)  LOC7471849 (ppo)  LOC7475776 (ppo)  LOC9271572 (osa)  LOC11418011 (mtr)  LOC11427946 (mtr)  LOC18104299 (ppo)  LOC25486021 (mtr)  LOC25490658 (mtr)  LOC100136964 (tae)  LOC100136965 (tae)  LOC100136998 (tae)  AGL11 (gma)  LOC100776263 (gma)  LOC100782733 (gma)  LOC100785089 (gma)  LOC100790650 (gma)  AGL1 (gma)  LOC100800107 (gma)  LOC100808734 (gma)  AGL1L (gma)  MBP3 (sly)  LOC103830183 (bra)  LOC103838884 (bra)  LOC103841753 (bra)  LOC103856965 (bra)  LOC103858546 (bra)  LOC103861026 (bra)  LOC103862959 (bra)  LOC103866661 (bra)  LOC123077697 (tae)  LOC123110996 (tae)  LOC123119942 (tae)  LOC123169989 (tae)  LOC123426234 (hvu)  LOC123442755 (hvu)  LOC123443104 (hvu) 
Subcellular
localization
wolf
nucl 10  (predict for NP_001078311.1)
nucl 9  (predict for NP_001190130.1)
nucl 5,  vacu 2,  cyto 1,  mito 1,  plas 1,  cyto_pero 1,  mito_plas 1,  cyto_E.R. 1  (predict for NP_001325709.1)
nucl 9,  cyto_nucl 5  (predict for NP_001325710.1)
nucl 10  (predict for NP_191437.1)
Subcellular
localization
TargetP
other 9  (predict for NP_001078311.1)
other 9  (predict for NP_001190130.1)
other 9  (predict for NP_001325709.1)
other 8  (predict for NP_001325710.1)
other 9  (predict for NP_191437.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with SHP1 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
6.7 AT5G60140 AP2/B3-like transcriptional factor family protein [detail] 836136
5.3 STK K-box region and MADS-box transcription factor family protein [detail] 826586
4.6 SVL3 SHV3-like 3 [detail] 821598
Coexpressed
gene list		 [Coexpressed gene list for SHP1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
251555_at
251555_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
251555_at
251555_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
251555_at
251555_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 825047      
Refseq ID (protein) NP_001078311.1 
NP_001190130.1 
NP_001325709.1 
NP_001325710.1 
NP_191437.1 


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