ATTED-II : GeneID search result

[←][→] ath AT3G58780 Gene

functional annotation

Function

K-box region and MADS-box transcription factor family protein

GO BP

GO:0048481 [list] [network] plant ovule development	(57 genes)	IMP
GO:0048440 [list] [network] carpel development	(79 genes)	IMP
GO:0045944 [list] [network] positive regulation of transcription by RNA polymerase II	(206 genes)	IEA
GO:0040008 [list] [network] regulation of growth	(315 genes)	IEA

GO CC

GO:0005634 [list] [network] nucleus

(10793 genes)

ISM

GO MF

GO:0046983 [list] [network] protein dimerization activity	(570 genes)	IEA
GO:0044212 [list] [network] transcription regulatory region DNA binding	(871 genes)	IPI
GO:0003700 [list] [network] DNA-binding transcription factor activity	(1599 genes)	IEA ISS
GO:0003677 [list] [network] DNA binding	(2280 genes)	ISS
GO:0005515 [list] [network] protein binding	(4605 genes)	IPI

KEGG

Protein

NP_001078311.1 NP_001190130.1 NP_001325709.1 NP_001325710.1 NP_191437.1

BLAST

NP_001078311.1 NP_001190130.1 NP_001325709.1 NP_001325710.1 NP_191437.1

Orthologous

[Ortholog page] LOC542039 (zma) AG1 (sly) TAGL1 (sly) AGL11 (sly) LOC732595 (gma) SHP2 (ath) STK (ath) AG (ath) LOC4324888 (osa) LOC4338067 (osa) LOC9271572 (osa) LOC11418011 (mtr) LOC11427946 (mtr) LOC25486021 (mtr) LOC25490658 (mtr) LOC100037764 (zma) MADS1 (vvi) MADS5 (vvi) AG (vvi) AGL11 (gma) LOC100776263 (gma) LOC100782733 (gma) LOC100785089 (gma) LOC100790650 (gma) AGL1 (gma) LOC100800107 (gma) LOC100808734 (gma) AGL1L (gma) MBP3 (sly) LOC103830183 (bra) LOC103838884 (bra) LOC103841753 (bra) LOC103856965 (bra) LOC103858546 (bra) LOC103861026 (bra) LOC103862959 (bra) LOC103866661 (bra)

Subcellular
localization
wolf

nucl 10	(predict for NP_001078311.1)
nucl 9	(predict for NP_001190130.1)
nucl 5, vacu 2, cyto 1, mito 1, plas 1, cyto_pero 1, mito_plas 1, cyto_E.R. 1	(predict for NP_001325709.1)
nucl 9, cyto_nucl 5	(predict for NP_001325710.1)
nucl 10	(predict for NP_191437.1)

Subcellular
localization
TargetP

other 9	(predict for NP_001078311.1)
other 9	(predict for NP_001190130.1)
other 9	(predict for NP_001325709.1)
other 8	(predict for NP_001325710.1)
other 9	(predict for NP_191437.1)

Gene coexpression

Network^*for
coexpressed
genes

Coexpressed
gene list

[Coexpressed gene list for SHP1]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

251555_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

251555_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

251555_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	825047
Refseq ID (protein)	NP_001078311.1
	NP_001190130.1
	NP_001325709.1
	NP_001325710.1
	NP_191437.1

The preparation time of this page was 0.2 [sec].