[←][→] ath   AT3G58840 Gene
functional annotation
Function   Tropomyosin-like protein  
GO BP
GO:0007031 [list] [network] peroxisome organization  (36 genes)  IMP  
GO:0007005 [list] [network] mitochondrion organization  (158 genes)  IMP  
GO CC
GO:0005778 [list] [network] peroxisomal membrane  (38 genes)  IDA  
GO:0005741 [list] [network] mitochondrial outer membrane  (57 genes)  IEA  
GO:0031966 [list] [network] mitochondrial membrane  (306 genes)  IDA  
GO:0005777 [list] [network] peroxisome  (325 genes)  IDA  
GO:0005829 [list] [network] cytosol  (3506 genes)  HDA  
GO:0005739 [list] [network] mitochondrion  (4405 genes)  IDA  
GO:0016021 [list] [network] integral component of membrane  (4803 genes)  IEA  
GO:0009536 [list] [network] plastid  (5519 genes)  IDA  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  ISM  
GO MF
GO:0042803 [list] [network] protein homodimerization activity  (158 genes)  IPI  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_001078312.1  NP_191443.1 
BLAST NP_001078312.1  NP_191443.1 
Orthologous [Ortholog page] PMD2 (ath)  LOC7464798 (ppo)  LOC7468741 (ppo)  LOC11429969 (mtr)  LOC100247157 (vvi)  LOC100781661 (gma)  LOC100814031 (gma)  LOC101251517 (sly)  LOC103844030 (bra)  LOC103866656 (bra)  LOC104644312 (sly) 
Subcellular
localization
wolf
cyto 4,  nucl 1,  mito 1,  chlo 1,  plas 1,  vacu 1,  E.R. 1,  golg 1,  cyto_mito 1,  cysk_nucl 1,  golg_plas 1,  E.R._vacu 1,  E.R._plas 1  (predict for NP_001078312.1)
cyto 4,  nucl 1,  mito 1,  chlo 1,  plas 1,  vacu 1,  E.R. 1,  golg 1,  cyto_mito 1,  cysk_nucl 1,  golg_plas 1,  E.R._vacu 1,  E.R._plas 1  (predict for NP_191443.1)
Subcellular
localization
TargetP
other 9  (predict for NP_001078312.1)
other 9  (predict for NP_191443.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 RNA transport 2
Genes directly connected with PMD1 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
9.2 AT3G24080 KRR1 family protein [detail] 821994
8.9 AT5G60030 hypothetical protein [detail] 836125
8.3 AT5G53800 nucleic acid-binding protein [detail] 835461
6.3 AT3G20430 phosphorylated adapter RNA export-like protein [detail] 821588
5.7 AT4G15820 ABC subfamily C protein [detail] 827263
Coexpressed
gene list		 [Coexpressed gene list for PMD1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
251556_at
251556_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
251556_at
251556_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
251556_at
251556_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 825053      
Refseq ID (protein) NP_001078312.1 
NP_191443.1 


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