[←][→] ath   At3g59040 Gene
functional annotation
Function   Tetratricopeptide repeat (TPR)-like superfamily protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO CC
GO:0005739 [list] [network] mitochondrion  (4228 genes)  ISM  
GO:0009507 [list] [network] chloroplast  (5004 genes)  IDA ISM  
GO:0005634 [list] [network] nucleus  (10305 genes)  IDA  
GO:0005737 [list] [network] cytoplasm  (13880 genes)  IDA  
GO MF
GO:0003729 [list] [network] mRNA binding  (1535 genes)  IDA  
KEGG
Protein NP_191463.2  NP_974457.1 
BLAST NP_191463.2  NP_974457.1 
Orthologous [Ortholog page] LOC4344860 (osa)  LOC7478507 (ppo)  LOC11421922 (mtr)  LOC100786343 (gma)  LOC100796513 (gma)  LOC101251698 (sly)  LOC103841765 (bra)  LOC123063655 (tae)  LOC123080962 (tae)  LOC123172480 (tae)  LOC123445664 (hvu) 
Subcellular
localization
wolf
chlo 9,  chlo_mito 5  (predict for NP_191463.2)
chlo 6,  chlo_mito 4,  mito 1,  cyto 1,  plas 1,  extr 1,  cyto_plas 1  (predict for NP_974457.1)
Subcellular
localization
TargetP
chlo 7  (predict for NP_191463.2)
scret 8,  mito 4  (predict for NP_974457.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT3G59040 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
12.1 AT1G70200 RNA-binding (RRM/RBD/RNP motifs) family protein [detail] 843356
10.6 PTAC2 plastid transcriptionally active 2 [detail] 843824
9.6 EMB2453 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 830116
9.4 PDE338 Nucleic acid-binding proteins superfamily [detail] 843502
9.1 AT5G52010 C2H2-like zinc finger protein [detail] 835276
9.1 AT4G37920 endoribonuclease E-like protein [detail] 829948
8.5 EMB2279 pentatricopeptide (PPR) repeat-containing protein [detail] 839941
8.5 emb1417 Pentatricopeptide repeat (PPR) superfamily protein [detail] 827867
8.4 AT4G39960 Molecular chaperone Hsp40/DnaJ family protein [detail] 830157
7.7 AT3G51870 Mitochondrial substrate carrier family protein [detail] 824350
6.8 HY2 phytochromobilin:ferredoxin oxidoreductase, chloroplast / phytochromobilin synthase (HY2) [detail] 820069
Coexpressed
gene list		 [Coexpressed gene list for AT3G59040]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
251496_at
251496_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
251496_at
251496_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
251496_at
251496_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 825073      
Refseq ID (protein) NP_191463.2 
NP_974457.1 


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