[←][→] ath   At3g59060 Gene
functional annotation
Function   phytochrome interacting factor 3-like 6    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0010244 [list] [network] response to low fluence blue light stimulus by blue low-fluence system  (9 genes)  IDA  
GO:0010600 [list] [network] regulation of auxin biosynthetic process  (16 genes)  IDA  
GO:0009585 [list] [network] red, far-red light phototransduction  (20 genes)  IMP  
GO:0009693 [list] [network] ethylene biosynthetic process  (22 genes)  IMP  
GO:0010928 [list] [network] regulation of auxin mediated signaling pathway  (40 genes)  IDA  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  IDA ISM  
GO MF
GO:1990841 [list] [network] promoter-specific chromatin binding  (15 genes)  IPI  
GO:0046983 [list] [network] protein dimerization activity  (421 genes)  IEA  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1576 genes)  ISS  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG ath04075 [list] [network] Plant hormone signal transduction (291 genes)
Protein NP_001030889.1  NP_001030890.1  NP_191465.3  NP_851021.1 
BLAST NP_001030889.1  NP_001030890.1  NP_191465.3  NP_851021.1 
Orthologous [Ortholog page] PIF4 (ath)  LOC7464824 (ppo)  LOC7480707 (ppo)  LOC25490555 (mtr)  LOC100784531 (gma)  LOC100800166 (gma)  PIF4B (gma)  PIF4A (gma)  LOC101252303 (sly)  LOC103841766 (bra)  LOC103858039 (bra)  LOC103866034 (bra) 
Subcellular
localization
wolf
nucl 10  (predict for NP_001030889.1)
nucl 10  (predict for NP_001030890.1)
nucl 10  (predict for NP_191465.3)
nucl 10  (predict for NP_851021.1)
Subcellular
localization
TargetP
other 8,  chlo 3  (predict for NP_001030889.1)
other 8,  chlo 3  (predict for NP_001030890.1)
other 8,  chlo 3  (predict for NP_191465.3)
other 8,  chlo 3  (predict for NP_851021.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00196 Photosynthesis - antenna proteins 6
ath04075 Plant hormone signal transduction 2
Genes directly connected with PIL6 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
11.1 PIF4 phytochrome interacting factor 4 [detail] 818903
7.4 COL5 CONSTANS-like 5 [detail] 835872
6.9 LHCB2.2 photosystem II light harvesting complex protein 2.2 [detail] 815055
3.9 PIF7 phytochrome-interacting factor7 [detail] 836248
Coexpressed
gene list		 [Coexpressed gene list for PIL6]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
251497_at
251497_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
251497_at
251497_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
251497_at
251497_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 825075      
Refseq ID (protein) NP_001030889.1 
NP_001030890.1 
NP_191465.3 
NP_851021.1 


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