| functional annotation |
| Function |
crinkly4 |
Plant GARDEN Plant GARDEN JBrowse
|
| GO BP |
|
GO:0090392 [list] [network] sepal giant cell differentiation
|
(4 genes)
|
IMP
|
 |
|
GO:0032877 [list] [network] positive regulation of DNA endoreduplication
|
(6 genes)
|
IMP
|
|
|
GO:0009786 [list] [network] regulation of asymmetric cell division
|
(15 genes)
|
IMP
|
|
|
GO:0048829 [list] [network] root cap development
|
(16 genes)
|
IMP
|
|
|
GO:0010311 [list] [network] lateral root formation
|
(59 genes)
|
IMP
|
|
|
GO:0009793 [list] [network] embryo development ending in seed dormancy
|
(697 genes)
|
IMP
|
|
|
GO:0048364 [list] [network] root development
|
(1192 genes)
|
IGI
IMP
|
|
|
| GO CC |
|
| GO MF |
|
GO:0019199 [list] [network] transmembrane receptor protein kinase activity
|
(60 genes)
|
ISS
|
|
|
GO:0042803 [list] [network] protein homodimerization activity
|
(227 genes)
|
IDA
|
|
|
GO:0004674 [list] [network] protein serine/threonine kinase activity
|
(454 genes)
|
IEA
|
|
|
GO:0016301 [list] [network] kinase activity
|
(1068 genes)
|
ISS
|
|
|
GO:0005515 [list] [network] protein binding
|
(5066 genes)
|
IPI
|
|
|
| KEGG |
|
|
| Protein |
NP_191501.1
|
| BLAST |
NP_191501.1
|
| Orthologous |
[Ortholog page]
LOC4333525 (osa)
LOC7491759 (ppo)
LOC11426633 (mtr)
LOC18106919 (ppo)
LOC25492664 (mtr)
LOC100797455 (gma)
LOC100807392 (gma)
LOC100809215 (gma)
LOC100816264 (gma)
LOC101245615 (sly)
LOC103841786 (bra)
LOC123147342 (tae)
LOC123156413 (tae)
LOC123164476 (tae)
LOC123407707 (hvu)
|
Subcellular
localization
wolf |
|
chlo 5,
nucl 2,
cysk_nucl 1,
cyto 1,
mito 1,
E.R. 1,
cyto_E.R. 1
|
(predict for NP_191501.1)
|
|
Subcellular
localization
TargetP |
|
scret 7,
mito 4
|
(predict for NP_191501.1)
|
|
| Gene coexpression |
Network*for
coexpressed
genes |
| KEGG* ID |
Title |
#genes |
Link to the KEGG* map
(Multiple genes) |
| ath02010 |
ABC transporters |
2 |
 |
Genes directly connected with CR4 on the network
| coex z* |
Locus |
Function* |
CoexViewer |
Entrez Gene ID* |
| 7.7 |
PDF2 |
protodermal factor 2 |
[detail] |
825828 |
| 6.7 |
AT1G17200 |
Uncharacterized protein family (UPF0497) |
[detail] |
838291 |
| 6.4 |
ATML1 |
Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein |
[detail] |
828263 |
| 6.2 |
AT1G12330 |
cyclin-dependent kinase-like protein |
[detail] |
837787 |
| 5.8 |
ICR1 |
interactor of constitutive active rops 1 |
[detail] |
838284 |
| 5.8 |
AT5G18460 |
carboxyl-terminal peptidase (DUF239) |
[detail] |
831964 |
| 5.6 |
HDG11 |
homeodomain GLABROUS 11 |
[detail] |
843671 |
| 5.5 |
TRM17 |
GPI-anchored adhesin-like protein, putative (DUF3741) |
[detail] |
816543 |
| 5.4 |
AT2G46380 |
extra-large G-like protein, putative (DUF3133) |
[detail] |
819246 |
| 5.0 |
AT3G05430 |
Tudor/PWWP/MBT superfamily protein |
[detail] |
819708 |
|
Coexpressed
gene list |
[Coexpressed gene list for CR4]
|
| Gene expression |
| All samples |
[Expression pattern for all samples]
|
AtGenExpress*
(Development) |
251521_at
X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.
|
AtGenExpress*
(Stress) |
251521_at
X axis is samples (pdf file), and Y axis is log2-expression.
|
AtGenExpress*
(Hormone) |
251521_at
X axis is samples (xls file), and Y axis is log-expression.
|
At3g59420 Gene
