[][] ath   AT3G59940 Gene
functional annotation
Function   Galactose oxidase/kelch repeat superfamily protein
GO BP
GO:0080037 [list] [network] negative regulation of cytokinin-activated signaling pathway  (6 genes)  IGI  
GO:2000762 [list] [network] regulation of phenylpropanoid metabolic process  (19 genes)  IGI  
GO:0016567 [list] [network] protein ubiquitination  (624 genes)  IEA  
GO CC
GO:0005829 [list] [network] cytosol  (3506 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  ISM  
GO MF
KEGG
Protein NP_191553.1 
BLAST NP_191553.1 
Orthologous [Ortholog page] AT2G44130 (ath)LOC4350190 (osa)LOC100250782 (vvi)LOC100273397 (zma)LOC100383172 (zma)LOC103647976 (zma)LOC103841849 (bra)LOC103858118 (bra)LOC103866770 (bra)LOC107277071 (osa)
Subcellular
localization
wolf
nucl 8,  cyto 2  (predict for NP_191553.1)
Subcellular
localization
TargetP
other 7  (predict for NP_191553.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT3G59940 on the network
coex z* Locus Function* Coexpression
detail
Entrez Gene ID*
9.7 AT1G80440 Galactose oxidase/kelch repeat superfamily protein [detail] 844383
8.1 AT5G60680 transcription initiation factor TFIID subunit (Protein of unknown function, DUF584) [detail] 836189
7.9 AT1G23390 Kelch repeat-containing F-box family protein [detail] 838947
Coexpressed
gene list
[Coexpressed gene list for AT3G59940]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
251443_at
251443_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
251443_at
251443_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
251443_at
251443_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 825164    
Refseq ID (protein) NP_191553.1 


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