[][] ath   AT3G60180 Gene
functional annotation
Function   P-loop containing nucleoside triphosphate hydrolases superfamily protein
GO BP
GO:0006207 [list] [network] 'de novo' pyrimidine nucleobase biosynthetic process  (9 genes)  IEA  
GO:0016310 [list] [network] phosphorylation  (1279 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  IDA  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  IDA ISM  
GO MF
GO:0004127 [list] [network] cytidylate kinase activity  (3 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (2003 genes)  IEA  
KEGG ath00240 [list] [network] Pyrimidine metabolism (57 genes)
Protein NP_567093.1  NP_850726.1 
BLAST NP_567093.1  NP_850726.1 
Orthologous [Ortholog page] PYR6 (ath)LOC4330910 (osa)LOC4339882 (osa)LOC4343960 (osa)LOC7483783 (ppo)LOC11425503 (mtr)LOC100193828 (zma)LOC100241478 (vvi)LOC100281735 (zma)LOC100282335 (zma)LOC100306603 (gma)LOC100500111 (gma)LOC101243930 (sly)LOC101259471 (sly)LOC103837127 (bra)LOC103841868 (bra)LOC103854712 (bra)LOC103874463 (bra)
Subcellular
localization
wolf
nucl 3,  cysk_nucl 2,  cyto 2,  chlo 1,  plas 1,  cysk 1,  cyto_pero 1,  cyto_E.R. 1  (predict for NP_567093.1)
nucl 3,  cysk_nucl 2,  cyto 2,  chlo 1,  plas 1,  cysk 1,  cyto_pero 1,  cyto_E.R. 1  (predict for NP_850726.1)
Subcellular
localization
TargetP
other 9  (predict for NP_567093.1)
other 9  (predict for NP_850726.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT3G60180 on the network
coex z* Locus Function* Coexpression
detail
Entrez Gene ID*
5.5 AT3G47590 alpha/beta-Hydrolases superfamily protein [detail] 823913
5.3 AT3G24730 mRNA splicing factor, thioredoxin-like U5 snRNP [detail] 822071
5.1 AT4G32560 paramyosin-like protein [detail] 829391
Coexpressed
gene list
[Coexpressed gene list for AT3G60180]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
251426_at
251426_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
251426_at
251426_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
251426_at
251426_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 825188    
Refseq ID (protein) NP_567093.1 
NP_850726.1 


The preparation time of this page was 0.3 [sec].