| functional annotation |
| Function |
RWD domain-containing protein |
Plant GARDEN Plant GARDEN JBrowse
|
| GO BP |
|
GO:0009416 [list] [network] response to light stimulus
|
(1981 genes)
|
IEA
|
 |
|
| GO CC |
|
| GO MF |
|
GO:0061630 [list] [network] ubiquitin protein ligase activity
|
(78 genes)
|
IEA
|
|
|
| KEGG |
|
|
| Protein |
NP_001190140.1
NP_191589.3
|
| BLAST |
NP_001190140.1
NP_191589.3
|
| Orthologous |
[Ortholog page]
LOC4350739 (osa)
LOC7483799 (ppo)
LOC11409565 (mtr)
LOC25500058 (mtr)
LOC100791789 (gma)
LOC101256805 (sly)
LOC103862892 (bra)
LOC112323298 (ppo)
LOC123086001 (tae)
LOC123091999 (tae)
LOC123097419 (tae)
LOC123448484 (hvu)
|
Subcellular
localization
wolf |
|
nucl 7,
chlo 1,
cyto 1,
extr 1,
vacu 1
|
(predict for NP_001190140.1)
|
|
nucl 6,
cyto 1,
chlo 1,
extr 1,
vacu 1,
cyto_pero 1,
cyto_E.R. 1,
cyto_plas 1
|
(predict for NP_191589.3)
|
|
Subcellular
localization
TargetP |
|
other 8
|
(predict for NP_001190140.1)
|
|
other 8
|
(predict for NP_191589.3)
|
|
| Gene coexpression |
Network*for
coexpressed
genes |
Genes directly connected with AT3G60300 on the network
| coex z* |
Locus |
Function* |
CoexViewer |
Entrez Gene ID* |
| 12.0 |
BET10 |
bromodomain and extraterminal domain protein 10 |
[detail] |
821083 |
| 11.4 |
AT4G09830 |
nuclear receptor family 2 group C protein |
[detail] |
826572 |
| 10.7 |
VAMP724 |
vesicle-associated membrane protein 724 |
[detail] |
827258 |
| 9.8 |
WAV2 |
alpha/beta-Hydrolases superfamily protein |
[detail] |
832174 |
| 9.7 |
LARP6a |
RNA-binding protein |
[detail] |
834667 |
| 9.2 |
SYP23 |
syntaxin of plants 23 |
[detail] |
827494 |
| 9.1 |
CXIP4 |
CAX interacting protein 4 |
[detail] |
817440 |
| 8.8 |
MTN1 |
methylthioadenosine nucleosidase 1 |
[detail] |
830035 |
| 8.6 |
EMB1303 |
embryo defective 1303 |
[detail] |
842073 |
| 8.6 |
AT5G14390 |
alpha/beta-Hydrolases superfamily protein |
[detail] |
831290 |
| 8.3 |
AT1G19680 |
RING/U-box superfamily protein |
[detail] |
838555 |
| 8.3 |
AT1G26665 |
Mediator complex, subunit Med10 |
[detail] |
839207 |
| 8.1 |
AT5G23380 |
hypothetical protein (DUF789) |
[detail] |
832402 |
| 8.0 |
AT3G58670 |
2-aminoethanethiol dioxygenase, putative (DUF1637) |
[detail] |
825036 |
| 7.8 |
CP5 |
Polyketide cyclase/dehydrase and lipid transport superfamily protein |
[detail] |
842780 |
| 7.8 |
TLP2 |
tubby like protein 2 |
[detail] |
816344 |
| 7.5 |
LARP6b |
RNA-binding protein |
[detail] |
819002 |
| 7.0 |
ACD11 |
Glycolipid transfer protein (GLTP) family protein |
[detail] |
818034 |
| 6.8 |
SBI1 |
Leucine carboxyl methyltransferase |
[detail] |
837541 |
| 6.2 |
AT5G58575 |
SAGA-associated factor-like protein |
[detail] |
835971 |
| 6.1 |
AT4G31290 |
ChaC-like family protein |
[detail] |
829256 |
| 6.0 |
AT2G41710 |
Integrase-type DNA-binding superfamily protein |
[detail] |
818770 |
| 5.3 |
AT1G72740 |
Homeodomain-like/winged-helix DNA-binding family protein |
[detail] |
843606 |
|
Coexpressed
gene list |
[Coexpressed gene list for AT3G60300]
|
| Gene expression |
| All samples |
[Expression pattern for all samples]
|
AtGenExpress*
(Development) |
251403_at
X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.
|
AtGenExpress*
(Stress) |
251403_at
X axis is samples (pdf file), and Y axis is log2-expression.
|
AtGenExpress*
(Hormone) |
251403_at
X axis is samples (xls file), and Y axis is log-expression.
|
At3g60300 Gene
