ATTED-II : GeneID search result

[←][→] ath AT3G60480 Gene

functional annotation

Function

StAR lipid transfer-like protein

GO BP

GO CC

GO:0005739 [list] [network] mitochondrion	(4405 genes)	ISM
GO:0016021 [list] [network] integral component of membrane	(4803 genes)	IEA

GO MF

KEGG

Protein

NP_001327546.1 NP_001327547.1 NP_567100.1

BLAST

NP_001327546.1 NP_001327547.1 NP_567100.1

Orthologous

[Ortholog page] LOC4336582 (osa) LOC25499884 (mtr) LOC100266789 (vvi) LOC100777606 (gma) LOC101262150 (sly) LOC103841897 (bra)

Subcellular
localization
wolf

chlo 4, cyto 1, vacu 1, E.R. 1, E.R._vacu 1, cyto_E.R. 1	(predict for NP_001327546.1)
chlo 3, nucl 3, golg 1, cysk_nucl 1, cyto 1, mito 1, plas 1, E.R. 1, E.R._plas 1, mito_plas 1, cyto_E.R. 1, cyto_plas 1	(predict for NP_001327547.1)
nucl 4, chlo 3, E.R. 1, E.R._plas 1, cyto 1, pero 1, cyto_pero 1	(predict for NP_567100.1)

Subcellular
localization
TargetP

other 8	(predict for NP_001327546.1)
other 8	(predict for NP_001327547.1)
other 8	(predict for NP_567100.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

Genes directly connected with AT3G60480 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
5.0	AT1G02160	Cox19 family protein (CHCH motif)	[detail]	839554
4.7	AT5G60460	Preprotein translocase Sec, Sec61-beta subunit protein	[detail]	28721282
4.7	SDH8	succinate dehydrogenase subunit	[detail]	819247
4.4	AT2G42485		[detail]	5007956
4.2	STP12	sugar transporter protein 12	[detail]	828233
4.1	AT3G58875	hypothetical protein	[detail]	28719414
3.8	AT5G08565	Transcription initiation Spt4-like protein	[detail]	830757

Coexpressed
gene list

[Coexpressed gene list for AT3G60480]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

251369_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

251369_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

251369_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	825219
Refseq ID (protein)	NP_001327546.1
	NP_001327547.1
	NP_567100.1

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