[←][→] ath   At3g60540 Gene
functional annotation
Function   Preprotein translocase Sec, Sec61-beta subunit protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0034976 [list] [network] response to endoplasmic reticulum stress  (68 genes)  IEA  
GO:0033013 [list] [network] tetrapyrrole metabolic process  (263 genes)  IEA  
GO:0016053 [list] [network] organic acid biosynthetic process  (622 genes)  IEA  
GO:0019752 [list] [network] carboxylic acid metabolic process  (1307 genes)  IEA  
GO:0007165 [list] [network] signal transduction  (2054 genes)  IEA  
GO CC
GO MF
KEGG ath03060 [list] [network] Protein export (54 genes)
ath04141 [list] [network] Protein processing in endoplasmic reticulum (215 genes)
ath04145 [list] [network] Phagosome (83 genes)
Protein NP_001327136.1  NP_191613.1  NP_974467.1 
BLAST NP_001327136.1  NP_191613.1  NP_974467.1 
Orthologous [Ortholog page] SEC61 BETA (ath)  LOC7453947 (ppo)  LOC9266625 (osa)  LOC11405922 (mtr)  LOC11413802 (mtr)  LOC11419972 (mtr)  LOC18105174 (ppo)  LOC100500335 (gma)  LOC100790740 (gma)  LOC101268107 (sly)  LOC101268397 (sly)  LOC103858150 (bra)  LOC103866191 (bra)  LOC103866860 (bra)  LOC123061342 (tae)  LOC123069928 (tae)  LOC123078395 (tae)  LOC123106344 (tae)  LOC123110125 (tae)  LOC123119135 (tae)  LOC123119136 (tae)  LOC123443711 (hvu) 
Subcellular
localization
wolf
chlo 8,  nucl 1,  cyto 1,  mito 1,  cyto_nucl 1  (predict for NP_001327136.1)
chlo 8,  nucl 1,  cyto 1,  mito 1,  cyto_nucl 1  (predict for NP_191613.1)
chlo 8,  nucl 1,  cyto 1,  mito 1,  cyto_nucl 1  (predict for NP_974467.1)
Subcellular
localization
TargetP
mito 5  (predict for NP_001327136.1)
mito 5  (predict for NP_191613.1)
mito 5  (predict for NP_974467.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 16
ath03060 Protein export 5
ath04145 Phagosome 4
Genes directly connected with AT3G60540 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
11.2 UTR1 UDP-galactose transporter 1 [detail] 814811
10.8 ATERDJ3B DNAJ heat shock family protein [detail] 825434
10.5 AT4G29520 nucleophosmin [detail] 829073
8.7 BIP3 Heat shock protein 70 (Hsp 70) family protein [detail] 837429
7.6 ERO1 endoplasmic reticulum oxidoreductins 1 [detail] 843560
Coexpressed
gene list		 [Coexpressed gene list for AT3G60540]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
251422_at
251422_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
251422_at
251422_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
251422_at
251422_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 825225      
Refseq ID (protein) NP_001327136.1 
NP_191613.1 
NP_974467.1 


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