[][] ath   AT3G61140 Gene
functional annotation
Function   COP9 signalosome complex subunit 1
GO BP
GO:0000338 [list] [network] protein deneddylation  (11 genes)  IMP TAS  
GO:0009646 [list] [network] response to absence of light  (45 genes)  IEP  
GO:0009585 [list] [network] red, far-red light phototransduction  (54 genes)  IEA  
GO:0006972 [list] [network] hyperosmotic response  (68 genes)  IEP  
GO:0009640 [list] [network] photomorphogenesis  (71 genes)  TAS  
GO:0009651 [list] [network] response to salt stress  (485 genes)  IEP  
GO:0009793 [list] [network] embryo development ending in seed dormancy  (547 genes)  IMP  
GO CC
GO:0008180 [list] [network] COP9 signalosome  (12 genes)  IBA IPI TAS  
GO:0005829 [list] [network] cytosol  (3506 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IDA ISM  
GO MF
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_567109.1 
BLAST NP_567109.1 
Orthologous [Ortholog page] LOC4331403 (osa)LOC7464893 (ppo)LOC7494044 (ppo)LOC25502321 (mtr)LOC100250638 (vvi)LOC100283343 (zma)LOC100782579 (gma)LOC100812958 (gma)LOC101259078 (sly)LOC103830283 (bra)LOC103841938 (bra)
Subcellular
localization
wolf
cyto 6,  nucl 2,  chlo 1,  mito 1,  plas 1,  chlo_mito 1,  mito_plas 1  (predict for NP_567109.1)
Subcellular
localization
TargetP
other 8,  chlo 3  (predict for NP_567109.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 RNA transport 3
ath03050 Proteasome 3
Genes directly connected with FUS6 on the network
coex z* Locus Function* Coexpression
detail
Entrez Gene ID*
10.5 COP13 Proteasome component (PCI) domain protein [detail] 831275
8.6 AT1G43860 sequence-specific DNA binding transcription factor [detail] 840982
8.5 UBP6 ubiquitin-specific protease 6 [detail] 841596
7.5 COP8 Proteasome component (PCI) domain protein [detail] 834312
7.4 AT3G02320 N2,N2-dimethylguanosine tRNA methyltransferase [detail] 820451
6.1 RANGAP2 RAN GTPase activating protein 2 [detail] 832052
5.9 CSN6A COP9 signalosome subunit 6A [detail] 835727
Coexpressed
gene list
[Coexpressed gene list for FUS6]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
251311_at
251311_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
251311_at
251311_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
251311_at
251311_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 825286    
Refseq ID (protein) NP_567109.1 


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