[←][→] ath   AT3G61240 Gene
functional annotation
Function   DEA(D/H)-box RNA helicase family protein  
GO BP
GO:0034063 [list] [network] stress granule assembly  (7 genes)  IBA  
GO:0033962 [list] [network] cytoplasmic mRNA processing body assembly  (11 genes)  IBA  
GO:0051028 [list] [network] mRNA transport  (63 genes)  IEA  
GO:0006417 [list] [network] regulation of translation  (146 genes)  IEA  
GO:0006397 [list] [network] mRNA processing  (376 genes)  IEA  
GO CC
GO:0010494 [list] [network] cytoplasmic stress granule  (20 genes)  IBA  
GO:0000932 [list] [network] P-body  (56 genes)  IBA  
GO:0005829 [list] [network] cytosol  (3506 genes)  RCA  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  ISM  
GO MF
GO:0003724 [list] [network] RNA helicase activity  (75 genes)  IEA  
GO:0003729 [list] [network] mRNA binding  (1026 genes)  IBA IDA  
GO:0003723 [list] [network] RNA binding  (1790 genes)  IBA  
GO:0005524 [list] [network] ATP binding  (2003 genes)  IEA  
KEGG ath03018 [list] [network] RNA degradation (113 genes)
Protein NP_191683.1  NP_974472.1 
BLAST NP_191683.1  NP_974472.1 
Orthologous [Ortholog page] AT2G45810 (ath)  RH8 (ath)  LOC4330120 (osa)  LOC4336501 (osa)  LOC4349053 (osa)  LOC7461759 (ppo)  LOC11427502 (mtr)  LOC11436932 (mtr)  LOC25481490 (mtr)  LOC100194030 (zma)  LOC100241111 (vvi)  LOC100251721 (vvi)  LOC100272835 (zma)  LOC100282580 (zma)  LOC100788032 (gma)  LOC100800861 (gma)  LOC100801402 (gma)  LOC100818905 (gma)  LOC101251630 (sly)  LOC101253227 (sly)  LOC101258459 (sly)  LOC103830288 (bra)  LOC103836901 (bra)  LOC103841951 (bra)  LOC103858860 (bra)  LOC103866240 (bra)  LOC106794117 (gma) 
Subcellular
localization
wolf
nucl 4,  mito 2,  cyto 1,  chlo_mito 1,  mito_plas 1  (predict for NP_191683.1)
nucl 4,  mito 2,  cyto 1,  chlo_mito 1,  mito_plas 1  (predict for NP_974472.1)
Subcellular
localization
TargetP
mito 6,  other 6  (predict for NP_191683.1)
mito 6,  other 6  (predict for NP_974472.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 RNA transport 6
ath03018 RNA degradation 5
ath03008 Ribosome biogenesis in eukaryotes 2
Genes directly connected with AT3G61240 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.9 XPO1A exportin 1A [detail] 831565
6.8 DCP5 decapping 5 [detail] 839152
6.7 AT5G43960 Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain-containing protein [detail] 834419
6.7 RANGAP2 RAN GTPase activating protein 2 [detail] 832052
6.6 RH8 RNAhelicase-like 8 [detail] 828042
6.4 HBT CDC27 family protein [detail] 816519
6.4 AT1G07705 NOT2 / NOT3 / NOT5 family [detail] 837284
6.1 AT4G25320 AT hook motif DNA-binding family protein [detail] 828635
Coexpressed
gene list		 [Coexpressed gene list for AT3G61240]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
251362_at
251362_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
251362_at
251362_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
251362_at
251362_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 825296      
Refseq ID (protein) NP_191683.1 
NP_974472.1 


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