[←][→] ath   At3g61390 Gene
functional annotation
Function   RING/U-box superfamily protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0016567 [list] [network] protein ubiquitination  (434 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO:0005737 [list] [network] cytoplasm  (13880 genes)  ISM  
GO MF
GO:0004842 [list] [network] ubiquitin-protein transferase activity  (261 genes)  IEA  
KEGG
Protein NP_001325791.1  NP_001325792.1  NP_001325793.1  NP_191698.2  NP_850732.1 
BLAST NP_001325791.1  NP_001325792.1  NP_001325793.1  NP_191698.2  NP_850732.1 
Orthologous [Ortholog page] AT2G45920 (ath)  AT3G61410 (ath)  LOC4349328 (osa)  LOC9269569 (osa)  LOC103841962 (bra)  LOC103841964 (bra)  LOC103862827 (bra)  LOC103863300 (bra)  LOC103866251 (bra)  LOC103866934 (bra)  LOC117125720 (bra)  LOC123091813 (tae)  LOC123091826 (tae)  LOC123131915 (tae)  LOC123131981 (tae)  LOC123159031 (tae)  LOC123168743 (tae)  LOC123438181 (hvu)  LOC123438197 (hvu) 
Subcellular
localization
wolf
nucl 5,  cyto 4,  mito 1,  golg_plas 1  (predict for NP_001325791.1)
cyto 4,  nucl 3,  chlo 1,  pero 1,  cysk 1,  golg_plas 1  (predict for NP_001325792.1)
cyto 4,  nucl 3,  mito 1,  cysk_nucl 1  (predict for NP_001325793.1)
cyto 6,  nucl 1,  chlo 1,  mito 1,  cysk 1,  chlo_mito 1,  golg_plas 1  (predict for NP_191698.2)
cyto 5,  chlo 1,  nucl 1,  mito 1,  cysk 1,  golg_plas 1  (predict for NP_850732.1)
Subcellular
localization
TargetP
other 8,  mito 5  (predict for NP_001325791.1)
other 8  (predict for NP_001325792.1)
other 8,  mito 5  (predict for NP_001325793.1)
other 8  (predict for NP_191698.2)
other 8  (predict for NP_850732.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT3G61390 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
6.9 GLP9 germin-like protein 9 [detail] 827113
6.7 GLR2.5 glutamate receptor 2.5 [detail] 830991
6.3 AATP1 AAA-ATPase 1 [detail] 833998
6.1 AT3G01175 uncharacterized protein [detail] 820400
5.7 AT5G38350 Disease resistance protein (NBS-LRR class) family [detail] 833817
5.6 CAX4 cation exchanger 4 [detail] 831754
5.5 AT3G45410 Concanavalin A-like lectin protein kinase family protein [detail] 823679
4.2 AT1G03660 Ankyrin-repeat containing protein [detail] 28716028
Coexpressed
gene list		 [Coexpressed gene list for AT3G61390]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
251334_at
251334_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
251334_at
251334_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
251334_at
251334_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 825311      
Refseq ID (protein) NP_001325791.1 
NP_001325792.1 
NP_001325793.1 
NP_191698.2 
NP_850732.1 


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