[←][→] ath   At3g61950 Gene
functional annotation
Function   basic helix-loop-helix (bHLH) DNA-binding superfamily protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0009631 [list] [network] cold acclimation  (59 genes)  IMP  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1656 genes)  ISS TAS  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  IDA ISM  
GO MF
GO:0042803 [list] [network] protein homodimerization activity  (227 genes)  IPI  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1576 genes)  ISS  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG
Protein NP_001325694.1  NP_001325695.1  NP_001325696.1  NP_001325697.1  NP_567121.1  NP_850735.1 
BLAST NP_001325694.1  NP_001325695.1  NP_001325696.1  NP_001325697.1  NP_567121.1  NP_850735.1 
Orthologous [Ortholog page] AT2G46810 (ath)  LOC7455367 (ppo)  LOC7478805 (ppo)  LOC25500607 (mtr)  LOC100783582 (gma)  LOC100789928 (gma)  LOC103842020 (bra)  LOC103848310 (bra)  LOC103866310 (bra)  LOC103866430 (bra) 
Subcellular
localization
wolf
nucl 8,  cyto_nucl 5,  extr 1,  cysk 1  (predict for NP_001325694.1)
nucl 9,  cyto_nucl 5  (predict for NP_001325695.1)
nucl 7,  cyto 1,  pero 1,  cysk 1,  cyto_E.R. 1,  cyto_plas 1  (predict for NP_001325696.1)
nucl 9,  cyto_nucl 5  (predict for NP_001325697.1)
nucl 6,  cyto_nucl 4,  chlo 1,  cyto 1,  extr 1,  cysk 1,  mito_plas 1  (predict for NP_567121.1)
nucl 7,  cyto 1,  pero 1,  cysk 1,  cyto_E.R. 1,  cyto_plas 1  (predict for NP_850735.1)
Subcellular
localization
TargetP
other 7,  mito 3  (predict for NP_001325694.1)
other 7,  mito 3  (predict for NP_001325695.1)
other 8  (predict for NP_001325696.1)
other 7,  mito 3  (predict for NP_001325697.1)
other 7,  mito 3  (predict for NP_567121.1)
other 8  (predict for NP_850735.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT3G61950 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
7.5 bHLH071 beta HLH protein 71 [detail] 834712
6.0 TRM13 Phosphatidylinositol N-acetyglucosaminlytransferase subunit P-like protein [detail] 819198
4.8 GH9B18 glycosyl hydrolase 9B18 [detail] 830056
4.7 AT5G10310 EPIDERMAL PATTERNING FACTOR-like protein [detail] 830895
Coexpressed
gene list		 [Coexpressed gene list for AT3G61950]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
251299_at
251299_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
251299_at
251299_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
251299_at
251299_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 825368      
Refseq ID (protein) NP_001325694.1 
NP_001325695.1 
NP_001325696.1 
NP_001325697.1 
NP_567121.1 
NP_850735.1 


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