[←][→] ath   At3g62030 Gene
functional annotation
Function   rotamase CYP 4    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0019344 [list] [network] cysteine biosynthetic process  (12 genes)  IMP  
GO:0000413 [list] [network] protein peptidyl-prolyl isomerization  (17 genes)  IDA  
GO:0010555 [list] [network] response to mannitol  (20 genes)  IMP  
GO:0045036 [list] [network] protein targeting to chloroplast  (45 genes)  IDA  
GO:0009642 [list] [network] response to light intensity  (373 genes)  IMP  
GO:0006979 [list] [network] response to oxidative stress  (545 genes)  IMP  
GO:0009651 [list] [network] response to salt stress  (607 genes)  IMP  
GO:0009737 [list] [network] response to abscisic acid  (1086 genes)  IEP  
GO:0007165 [list] [network] signal transduction  (2054 genes)  ISS  
GO CC
GO:0031977 [list] [network] thylakoid lumen  (67 genes)  HDA  
GO:0022626 [list] [network] cytosolic ribosome  (295 genes)  HDA  
GO:0048046 [list] [network] apoplast  (305 genes)  HDA  
GO:0009535 [list] [network] chloroplast thylakoid membrane  (315 genes)  HDA  
GO:0009579 [list] [network] thylakoid  (509 genes)  HDA  
GO:0009941 [list] [network] chloroplast envelope  (582 genes)  HDA  
GO:0009570 [list] [network] chloroplast stroma  (705 genes)  HDA IDA  
GO:0005829 [list] [network] cytosol  (2559 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5004 genes)  HDA ISM  
GO MF
GO:0003755 [list] [network] peptidyl-prolyl cis-trans isomerase activity  (37 genes)  IDA  
GO:0003729 [list] [network] mRNA binding  (1535 genes)  IDA  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG
Protein NP_001154684.1  NP_001190159.1  NP_191762.1 
BLAST NP_001154684.1  NP_001190159.1  NP_191762.1 
Orthologous [Ortholog page] LOC4327912 (osa)  LOC7487769 (ppo)  LOC11423421 (mtr)  LOC25484726 (mtr)  CYP28 (gma)  CYP14 (gma)  LOC103842032 (bra)  LOC103862800 (bra)  LOC123060766 (tae)  LOC123069323 (tae)  LOC123077845 (tae)  LOC123443228 (hvu) 
Subcellular
localization
wolf
chlo 3,  cyto 2,  nucl 1,  plas 1,  vacu 1,  chlo_mito 1,  nucl_plas 1  (predict for NP_001154684.1)
chlo 10  (predict for NP_001190159.1)
chlo 10  (predict for NP_191762.1)
Subcellular
localization
TargetP
mito 5  (predict for NP_001154684.1)
chlo 9  (predict for NP_001190159.1)
chlo 9  (predict for NP_191762.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 14
ath01200 Carbon metabolism 2
Genes directly connected with ROC4 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
16.6 AT3G11630 Thioredoxin superfamily protein [detail] 820335
14.7 emb1473 Ribosomal protein L13 family protein [detail] 844199
13.8 RPL15 ribosomal protein L15 [detail] 822189
13.6 RPS1 ribosomal protein S1 [detail] 833138
11.1 PGK1 phosphoglycerate kinase 1 [detail] 820461
10.1 GLYR2 glyoxylate reductase 2 [detail] 838342
9.4 AT2G24020 Putative BCR, YbaB family COG0718 [detail] 816936
7.2 FdC2 2Fe-2S ferredoxin-like superfamily protein [detail] 840149
Coexpressed
gene list		 [Coexpressed gene list for ROC4]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
251305_at
251305_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
251305_at
251305_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
251305_at
251305_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 825376      
Refseq ID (protein) NP_001154684.1 
NP_001190159.1 
NP_191762.1 


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