| functional annotation |
| Function |
rotamase CYP 4 |
|
| GO BP |
|
GO:0010555 [list] [network] response to mannitol
|
(18 genes)
|
IMP
|
 |
|
GO:0019344 [list] [network] cysteine biosynthetic process
|
(22 genes)
|
IMP
|
|
|
GO:0000413 [list] [network] protein peptidyl-prolyl isomerization
|
(32 genes)
|
IDA
IEA
|
|
|
GO:0045036 [list] [network] protein targeting to chloroplast
|
(46 genes)
|
IDA
|
|
|
GO:0009642 [list] [network] response to light intensity
|
(148 genes)
|
IMP
|
|
|
GO:0042742 [list] [network] defense response to bacterium
|
(399 genes)
|
IEP
|
|
|
GO:0006979 [list] [network] response to oxidative stress
|
(442 genes)
|
IMP
|
|
|
GO:0009651 [list] [network] response to salt stress
|
(485 genes)
|
IMP
|
|
|
GO:0009737 [list] [network] response to abscisic acid
|
(574 genes)
|
IEP
|
|
|
GO:0007165 [list] [network] signal transduction
|
(1575 genes)
|
ISS
|
|
|
| GO CC |
|
| GO MF |
|
GO:0003755 [list] [network] peptidyl-prolyl cis-trans isomerase activity
|
(54 genes)
|
IDA
|
|
|
GO:0005515 [list] [network] protein binding
|
(4605 genes)
|
IPI
|
|
|
| KEGG |
|
|
| Protein |
NP_001154684.1
NP_001190159.1
NP_191762.1
|
| BLAST |
NP_001154684.1
NP_001190159.1
NP_191762.1
|
| Orthologous |
[Ortholog page]
LOC4327912 (osa)
LOC7487769 (ppo)
LOC11423421 (mtr)
LOC25484726 (mtr)
LOC100250386 (vvi)
CYP28 (gma)
CYP14 (gma)
LOC103634647 (zma)
LOC103842032 (bra)
LOC103862800 (bra)
|
Subcellular
localization
wolf |
|
chlo 3,
cyto 2,
nucl 1,
plas 1,
vacu 1,
chlo_mito 1,
nucl_plas 1
|
(predict for NP_001154684.1)
|
|
chlo 10
|
(predict for NP_001190159.1)
|
|
chlo 10
|
(predict for NP_191762.1)
|
|
Subcellular
localization
TargetP |
|
mito 5
|
(predict for NP_001154684.1)
|
|
chlo 9
|
(predict for NP_001190159.1)
|
|
chlo 9
|
(predict for NP_191762.1)
|
|
| Gene coexpression |
Network*for
coexpressed
genes |
| KEGG* ID |
Title |
#genes |
Link to the KEGG* map
(Multiple genes) |
| ath03010 |
Ribosome |
10 |
 |
| ath01200 |
Carbon metabolism |
2 |
 |
Genes directly connected with ROC4 on the network
| coex z* |
Locus |
Function* |
Coexpression
detail |
Entrez Gene ID* |
| 14.5 |
AT3G11630 |
Thioredoxin superfamily protein |
[detail] |
820335 |
| 13.5 |
RPL15 |
ribosomal protein L15 |
[detail] |
822189 |
| 13.4 |
emb1473 |
Ribosomal protein L13 family protein |
[detail] |
844199 |
| 12.3 |
RPS1 |
ribosomal protein S1 |
[detail] |
833138 |
| 11.6 |
NDPK2 |
nucleoside diphosphate kinase 2 |
[detail] |
836451 |
| 11.0 |
PGK1 |
phosphoglycerate kinase 1 |
[detail] |
820461 |
| 10.3 |
PRXQ |
Thioredoxin superfamily protein |
[detail] |
822203 |
| 9.4 |
GLYR2 |
glyoxylate reductase 2 |
[detail] |
838342 |
| 8.4 |
PCB2 |
NAD(P)-binding Rossmann-fold superfamily protein |
[detail] |
831984 |
| 8.3 |
AT3G15520 |
Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein |
[detail] |
820791 |
| 7.8 |
ISPD |
Nucleotide-diphospho-sugar transferases superfamily protein |
[detail] |
814779 |
|
Coexpressed
gene list |
[Coexpressed gene list for ROC4]
|
| Gene expression |
| All samples |
[Expression pattern for all samples]
|
AtGenExpress*
(Development) |
251305_at
X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.
|
AtGenExpress*
(Stress) |
251305_at
X axis is samples (pdf file), and Y axis is log2-expression.
|
AtGenExpress*
(Hormone) |
251305_at
X axis is samples (xls file), and Y axis is log-expression.
|
AT3G62030 Gene
